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The map label for this gene is yraN [C]

Identifier: 119897162

GI number: 119897162

Start: 932374

End: 932787

Strand: Reverse

Name: yraN [C]

Synonym: azo0871

Alternate gene names: 119897162

Gene position: 932787-932374 (Counterclockwise)

Preceding gene: 119897183

Following gene: 119897161

Centisome position: 21.32

GC content: 71.01

Gene sequence:

>414_bases
ATGAAGACGGATCGGAAAGCGGAAAGAAGCGGAATTGTCGGCGCGGCCGCCAGCCCCATGCAAGCCCGCGGACGCGAAGG
GGAGGAGCGGGCCGCTGCCCATCTGGCGGCGCAAGGCGTCCGCATCCTCGCGCGCAACCGTCACTGCCGCGGCGGCGAAC
TCGACCTCGTCGGCCTGCACGGCGACATGCTGGTGTTCGTCGAGGTCCGGATGCGTGCGAATCCACGCTTTGGCGGCGCC
GCCGCCAGCATCACCGCCGAAAAGCGCCGTCGCGTCATCCTCGCCGCGCAATGGTGGCTGGCGGGCGAGGGCCGGCGCCA
CGCGCACCGCCCGTGCCGTTTCGACGTGGTGCTGCTCGAAGGACCCGCGACCACGCCGCCAACCTGGCTGCAAGCCGCGT
TCGACGCGGACTAG

Upstream 100 bases:

>100_bases
GCGAAAGCTCATGTCCTGCAGGTTTCCGAGCGGCGTCGCCACCACATACAATGACGGTGTCCTTGAAAGTACCGCGGTGG
GCGTGGAAGGAAATTCGGAC

Downstream 100 bases:

>100_bases
CCTTGGCACAGCCTGCTTGAGTAAGAAGGTGCAACCACCCCGAGCCGACCCTGAGAGCACTCACGCCGCCATGCTAGACT
GCAGCCCCTCCCAGAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKTDRKAERSGIVGAAASPMQARGREGEERAAAHLAAQGVRILARNRHCRGGELDLVGLHGDMLVFVEVRMRANPRFGGA
AASITAEKRRRVILAAQWWLAGEGRRHAHRPCRFDVVLLEGPATTPPTWLQAAFDAD

Sequences:

>Translated_137_residues
MKTDRKAERSGIVGAAASPMQARGREGEERAAAHLAAQGVRILARNRHCRGGELDLVGLHGDMLVFVEVRMRANPRFGGA
AASITAEKRRRVILAAQWWLAGEGRRHAHRPCRFDVVLLEGPATTPPTWLQAAFDAD
>Mature_137_residues
MKTDRKAERSGIVGAAASPMQARGREGEERAAAHLAAQGVRILARNRHCRGGELDLVGLHGDMLVFVEVRMRANPRFGGA
AASITAEKRRRVILAAQWWLAGEGRRHAHRPCRFDVVLLEGPATTPPTWLQAAFDAD

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=124, Percent_Identity=36.2903225806452, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y871_AZOSB (A1K3T3)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_932375.1
- ProteinModelPortal:   A1K3T3
- STRING:   A1K3T3
- GeneID:   4608927
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo0871
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- PhylomeDB:   A1K3T3
- ProtClustDB:   CLSK2487365
- BioCyc:   ASP62928:AZO0871-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14971; Mature: 14971

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDRKAERSGIVGAAASPMQARGREGEERAAAHLAAQGVRILARNRHCRGGELDLVGLH
CCCCCCCHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC
GDMLVFVEVRMRANPRFGGAAASITAEKRRRVILAAQWWLAGEGRRHAHRPCRFDVVLLE
CCEEEEEEEEECCCCCCCCCEEEEEHHHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEE
GPATTPPTWLQAAFDAD
CCCCCCHHHHEEEECCC
>Mature Secondary Structure
MKTDRKAERSGIVGAAASPMQARGREGEERAAAHLAAQGVRILARNRHCRGGELDLVGLH
CCCCCCCHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEC
GDMLVFVEVRMRANPRFGGAAASITAEKRRRVILAAQWWLAGEGRRHAHRPCRFDVVLLE
CCEEEEEEEEECCCCCCCCCEEEEEHHHCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEE
GPATTPPTWLQAAFDAD
CCCCCCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA