Click here to switch to the map view.

The map label for this gene is caiD [H]

Identifier: 119896971

GI number: 119896971

Start: 716527

End: 717309

Strand: Reverse

Name: caiD [H]

Synonym: azo0680

Alternate gene names: 119896971

Gene position: 717309-716527 (Counterclockwise)

Preceding gene: 119896975

Following gene: 119896964

Centisome position: 16.39

GC content: 70.88

Gene sequence:

>783_bases
ATGAACGGACAGATCCTTGTCGATCGCGGCGATGCCGTCGCTACGGTTTCCCTTTCCAACCCCGGCAAGCTGAACGCGGT
GAATGCCGGCATGTGGCGCCAGTTGCGCGCAGCCTTTGCGGAACTCGGTGCCGATCCCGGCGTACGCTGCATCGTGCTGC
GCGGAGCGGGCGACGAGGCCTTCGCCGCCGGCGGCGACATCGAGGAGTTCCGCACCGTGCGCGCGACGGTGGACGACGCC
CTGCACTACCACGAGGAACTGGTGGCGGCCGCGCTCAACGCGATCCGTGACTGTCCGGTGCCGACGGTGGCGGCGATCCG
CGGCGCCTGCGTCGGCGGCGGGCTGGAGATCGCCGGCTGCTGCGACCTGCGCATCGCGGGCGCGTCCTCGCGCTTCGGCG
CGCCGATCAACAAGCTCGGTTTCTCGATGTACCCGGGGGAGATGGCGGGCCTGCTGGCGCTGGTGGGGCCGGCGGTGGTG
CTGGAGATCCTGCTGGAGGGCCGCATCCTGGACGCCGCCGAGGCTTTGCAGAAGGGCCTACTGAGCAGGGTCGTCGATGA
CGCCAACGTGTTCGACGAAGCCGCCGCCTGCGCCGCGCGCATCGCCGCCGGGGCGCCGCTGGTGGCGCGCTGGCACAAGC
AGTGGGCGAAGCGCCTGCAGCGCCCGGAGCCGCTGAGCGAAGCCGAACGCCGCGCGGCCTTCGACTTCCTCGCCACCGAG
GACTACCGCGAGGGACTGGAAGCCTTCCTCGCCAAGCGCAAGCCGGTGTTCAAGGGGCGCTGA

Upstream 100 bases:

>100_bases
TCAAACTCAGCATCTGCGCCACAATCGTGGCCATCCGACTCCCCGCCGGGGGGCGTGGCGAGAGCGCCCGCCGCCCGGCC
GCAACCCCAACAGGCCCCCG

Downstream 100 bases:

>100_bases
ACGCGCCGCCGCTTCAGGCCACGCGCCGCAGCGGCGCCGGTGCCGGATCGGGCCGTGCGGCGCGGATGATGCGTTCGCGC
AGCCAGCGGCATTCGGCAGA

Product: putative carnitinyl-CoA dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNGQILVDRGDAVATVSLSNPGKLNAVNAGMWRQLRAAFAELGADPGVRCIVLRGAGDEAFAAGGDIEEFRTVRATVDDA
LHYHEELVAAALNAIRDCPVPTVAAIRGACVGGGLEIAGCCDLRIAGASSRFGAPINKLGFSMYPGEMAGLLALVGPAVV
LEILLEGRILDAAEALQKGLLSRVVDDANVFDEAAACAARIAAGAPLVARWHKQWAKRLQRPEPLSEAERRAAFDFLATE
DYREGLEAFLAKRKPVFKGR

Sequences:

>Translated_260_residues
MNGQILVDRGDAVATVSLSNPGKLNAVNAGMWRQLRAAFAELGADPGVRCIVLRGAGDEAFAAGGDIEEFRTVRATVDDA
LHYHEELVAAALNAIRDCPVPTVAAIRGACVGGGLEIAGCCDLRIAGASSRFGAPINKLGFSMYPGEMAGLLALVGPAVV
LEILLEGRILDAAEALQKGLLSRVVDDANVFDEAAACAARIAAGAPLVARWHKQWAKRLQRPEPLSEAERRAAFDFLATE
DYREGLEAFLAKRKPVFKGR
>Mature_260_residues
MNGQILVDRGDAVATVSLSNPGKLNAVNAGMWRQLRAAFAELGADPGVRCIVLRGAGDEAFAAGGDIEEFRTVRATVDDA
LHYHEELVAAALNAIRDCPVPTVAAIRGACVGGGLEIAGCCDLRIAGASSRFGAPINKLGFSMYPGEMAGLLALVGPAVV
LEILLEGRILDAAEALQKGLLSRVVDDANVFDEAAACAARIAAGAPLVARWHKQWAKRLQRPEPLSEAERRAAFDFLATE
DYREGLEAFLAKRKPVFKGR

Specific function: Could possibly oxidize fatty acids using specific components [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI194097323, Length=255, Percent_Identity=31.7647058823529, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI31542718, Length=255, Percent_Identity=31.7647058823529, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI70995211, Length=211, Percent_Identity=31.2796208530806, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI68989263, Length=202, Percent_Identity=33.6633663366337, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI45643119, Length=218, Percent_Identity=24.7706422018349, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI260275230, Length=218, Percent_Identity=24.7706422018349, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI260274832, Length=218, Percent_Identity=24.7706422018349, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI4502327, Length=242, Percent_Identity=30.5785123966942, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI37594469, Length=168, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI37594471, Length=168, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI20127408, Length=181, Percent_Identity=29.8342541436464, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787659, Length=262, Percent_Identity=32.0610687022901, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082183, Length=262, Percent_Identity=31.6793893129771, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI221142681, Length=267, Percent_Identity=30.7116104868914, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788597, Length=249, Percent_Identity=31.7269076305221, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1790281, Length=226, Percent_Identity=30.0884955752212, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788682, Length=196, Percent_Identity=31.1224489795918, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=30.3846153846154, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17554946, Length=251, Percent_Identity=32.2709163346614, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17536985, Length=262, Percent_Identity=28.2442748091603, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=31.6, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17534483, Length=207, Percent_Identity=30.4347826086957, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17540306, Length=257, Percent_Identity=29.9610894941634, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17540714, Length=215, Percent_Identity=26.9767441860465, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17560910, Length=263, Percent_Identity=28.5171102661597, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17558304, Length=183, Percent_Identity=31.6939890710383, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI25144276, Length=185, Percent_Identity=28.6486486486486, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508951, Length=187, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653139, Length=266, Percent_Identity=29.6992481203008, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI20129971, Length=254, Percent_Identity=31.496062992126, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24653477, Length=254, Percent_Identity=31.496062992126, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19920382, Length=260, Percent_Identity=27.6923076923077, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24650670, Length=214, Percent_Identity=31.7757009345794, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21357171, Length=202, Percent_Identity=30.6930693069307, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24654903, Length=184, Percent_Identity=26.6304347826087, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19922422, Length=266, Percent_Identity=24.0601503759398, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.17 [H]

Molecular weight: Translated: 27519; Mature: 27519

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGQILVDRGDAVATVSLSNPGKLNAVNAGMWRQLRAAFAELGADPGVRCIVLRGAGDEA
CCCCEEEECCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
FAAGGDIEEFRTVRATVDDALHYHEELVAAALNAIRDCPVPTVAAIRGACVGGGLEIAGC
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE
CDLRIAGASSRFGAPINKLGFSMYPGEMAGLLALVGPAVVLEILLEGRILDAAEALQKGL
ECEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LSRVVDDANVFDEAAACAARIAAGAPLVARWHKQWAKRLQRPEPLSEAERRAAFDFLATE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
DYREGLEAFLAKRKPVFKGR
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNGQILVDRGDAVATVSLSNPGKLNAVNAGMWRQLRAAFAELGADPGVRCIVLRGAGDEA
CCCCEEEECCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH
FAAGGDIEEFRTVRATVDDALHYHEELVAAALNAIRDCPVPTVAAIRGACVGGGLEIAGC
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE
CDLRIAGASSRFGAPINKLGFSMYPGEMAGLLALVGPAVVLEILLEGRILDAAEALQKGL
ECEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LSRVVDDANVFDEAAACAARIAAGAPLVARWHKQWAKRLQRPEPLSEAERRAAFDFLATE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
DYREGLEAFLAKRKPVFKGR
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]