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The map label for this gene is ybiX [C]

Identifier: 119896899

GI number: 119896899

Start: 636324

End: 637007

Strand: Direct

Name: ybiX [C]

Synonym: azo0608

Alternate gene names: 119896899

Gene position: 636324-637007 (Clockwise)

Preceding gene: 119896898

Following gene: 119896900

Centisome position: 14.54

GC content: 67.11

Gene sequence:

>684_bases
ATGCTGATCACGATCGACGACGTCCTGAGCCCCGAGGAGCTGGCACAGGCGCGCAAGCTGATCGCGGCCTCGCGCTGGGT
CAGCGGCCATGTCACTGCTGGCCCGCAGGCGCTTCATTCCAAGAACAACGAGCAACTGCCGGAAGATGCCGAACATCTGC
CCGCGCTGCGCCGCCTCATCCTCGGAGCGCTCAACCGCAACCCGCTGTTCTTCGCCGCGGCGCTGCCGCTGCGCGTGCTC
ACGCCCTTCTTCAACCGCTACGCCGGCGACAGCAACCACTACGGTTACCACACCGACAACGCGATGCGGCTGGCGCCCGA
AGGCGGCTATGTGCGCGCCGATGTCTCGGCCACCGTGTTCCTGTCCGACCCGGAGGAATACGAAGGCGGCGTGCTGACCA
TCGCCGACACCTTCGGCACCCACGGCGTCAAGCTCAAGGCCGGCAGCGCGGTGGTGTATCCGTCCTCGTCCATCCACCAG
GTCACGCCGGTCACCGCCGGCGCGCGCGTGGCGTGCTTCATGTTCATGCAGAGCATGGTGCGCGACGCCCATCAGCGCCG
CCTGCTGTTCGACATGGACATGGCGCTGCTGCAACTGCGCCAGAGTGTCGGGGAGGACAACGACGCCGTCGTGCGCCTCA
CCGGCACCTATCACAACCTGCTGCGCCTGTGGGCCGATGCCTGA

Upstream 100 bases:

>100_bases
CTGACCACCGAGTTCAAGTTCTGATCCATCCCTGCATCACCCGCGGTGCCGCCCTCAGCGGCGCGCCGCGGGCGTTTCAC
CCCACCCTGCCGGAGGCTGC

Downstream 100 bases:

>100_bases
GGCCGGCAAGCCTGCCCAGCGCCTTGCCGCCATCCCGCGCGAGATCGCGGCGGTCGCCGACTACGAGCGTTTCTCGCGCG
CCAGCCTGGACGACAACGCC

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MLITIDDVLSPEELAQARKLIAASRWVSGHVTAGPQALHSKNNEQLPEDAEHLPALRRLILGALNRNPLFFAAALPLRVL
TPFFNRYAGDSNHYGYHTDNAMRLAPEGGYVRADVSATVFLSDPEEYEGGVLTIADTFGTHGVKLKAGSAVVYPSSSIHQ
VTPVTAGARVACFMFMQSMVRDAHQRRLLFDMDMALLQLRQSVGEDNDAVVRLTGTYHNLLRLWADA

Sequences:

>Translated_227_residues
MLITIDDVLSPEELAQARKLIAASRWVSGHVTAGPQALHSKNNEQLPEDAEHLPALRRLILGALNRNPLFFAAALPLRVL
TPFFNRYAGDSNHYGYHTDNAMRLAPEGGYVRADVSATVFLSDPEEYEGGVLTIADTFGTHGVKLKAGSAVVYPSSSIHQ
VTPVTAGARVACFMFMQSMVRDAHQRRLLFDMDMALLQLRQSVGEDNDAVVRLTGTYHNLLRLWADA
>Mature_227_residues
MLITIDDVLSPEELAQARKLIAASRWVSGHVTAGPQALHSKNNEQLPEDAEHLPALRRLILGALNRNPLFFAAALPLRVL
TPFFNRYAGDSNHYGYHTDNAMRLAPEGGYVRADVSATVFLSDPEEYEGGVLTIADTFGTHGVKLKAGSAVVYPSSSIHQ
VTPVTAGARVACFMFMQSMVRDAHQRRLLFDMDMALLQLRQSVGEDNDAVVRLTGTYHNLLRLWADA

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=226, Percent_Identity=47.787610619469, Blast_Score=221, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y608_AZOSB (A1K320)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_932112.1
- ProteinModelPortal:   A1K320
- SMR:   A1K320
- STRING:   A1K320
- GeneID:   4606473
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo0608
- eggNOG:   COG3128
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- PhylomeDB:   A1K320
- ProtClustDB:   PRK05467
- BioCyc:   ASP62928:AZO0608-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24971; Mature: 24971

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 169-169

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITIDDVLSPEELAQARKLIAASRWVSGHVTAGPQALHSKNNEQLPEDAEHLPALRRLI
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
LGALNRNPLFFAAALPLRVLTPFFNRYAGDSNHYGYHTDNAMRLAPEGGYVRADVSATVF
HHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCEEEECCEEEEE
LSDPEEYEGGVLTIADTFGTHGVKLKAGSAVVYPSSSIHQVTPVTAGARVACFMFMQSMV
ECCCHHHCCCEEEEEECCCCCCEEEECCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHH
RDAHQRRLLFDMDMALLQLRQSVGEDNDAVVRLTGTYHNLLRLWADA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCC
>Mature Secondary Structure
MLITIDDVLSPEELAQARKLIAASRWVSGHVTAGPQALHSKNNEQLPEDAEHLPALRRLI
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
LGALNRNPLFFAAALPLRVLTPFFNRYAGDSNHYGYHTDNAMRLAPEGGYVRADVSATVF
HHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEECCCCCEEEECCEEEEE
LSDPEEYEGGVLTIADTFGTHGVKLKAGSAVVYPSSSIHQVTPVTAGARVACFMFMQSMV
ECCCHHHCCCEEEEEECCCCCCEEEECCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHH
RDAHQRRLLFDMDMALLQLRQSVGEDNDAVVRLTGTYHNLLRLWADA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA