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The map label for this gene is bfrD [H]

Identifier: 119896898

GI number: 119896898

Start: 634049

End: 636247

Strand: Direct

Name: bfrD [H]

Synonym: azo0607

Alternate gene names: 119896898

Gene position: 634049-636247 (Clockwise)

Preceding gene: 119896895

Following gene: 119896899

Centisome position: 14.49

GC content: 66.08

Gene sequence:

>2199_bases
ATGAAGAAGAAACTTGCGCGCAAGCCTGCCGCCCAGGCAGCAGCTGCCCCTGCCCAACCCGTCCGCCTGCTGCCGCTGGG
CGCCGCCCTGATGGCGGGCGGCTTGTCGCTGAGTGCGATGGCCCAGGACACCGCGACCCCGGCCCCGAAGGAGAAGGCGC
TGTCGGCCGTGACCGTCAACGCCACCACCGAGGCGCCGCCGGAAGACGGCTACCGCGCCACCGCCACCCGCGTCGGCAAG
ACCCTGCAAGACCCGCATGATGTGCCGCAAGCGATCACCACGGTGACCCGCTCGCTGATGGAAGAGCAGCAGGTCGGCTC
GCTGAAGGAAGCGCTGCGCAACGTCTCCGGCCTCACCTTCAACGCTGCCGAAGGCGGCCGCTCCGGCGACAACATGATGC
TGCGCGGCTTCTACACCTACGGCGACATCTACCTCGACGGCATCCGCGACACCGCCCAGTACAACCGCGAAACCTTCAAT
CTGGAGCAGGTCGACGTGCTGCGCGGCGCAGCGGCGATGCTGTTCGGCCGCGGCCAGGCCGGCGGCGTGATCAACCAGGT
GTCGAAGACGCCGATGCTGGTCGATCGCAACCGCGTCACCGGCAGCGTCGGCACCGACGACTACCGCGAACTCACCGGCG
ACTTCAACAAGGTGCTGGGCGACACCACCGCCGTGCGCCTGAACGTGATGAAGCGCGACGAAGGCAGCTGGCGCTCCAAC
CCGGCCACCGGCACCGAGCCCGAAATCCACCGCGAAGGCGCGGCCGCCAGCATCGGTTTCGGCCTCTTCACCGACAACGA
GCTGATCGTCAGCCACCAGTACCTGCGCACCGACGACAACCCCGATTACGGCATCTCGTTCGACAACGCCACCCACAAGC
CGACCAAGCGCTTCGACGAGAGCGACTTCTGGGGCATCGACCAGAACTTCGACGAAAGCGAGACCAACATCTCGACCGTC
ACCCACACCTACCGCTTCACCGGCAAGACCCAGCTGCGCACCCAGCTGCGCTACTCCAACTACAAGCGCGCCTACTGGGC
TTCGGCGCCGTCCAACACGGTGGCGCCGTCCGATCGCGGCAACGCGCCCAAGACGCGCAAGTCCGATACCGACAACCTGG
TGCTGCAGTCGGACTTCAGCACCGAGTTCAACGCGCTCGGCATGAAGCACGAGCTGGTCACCGGCATCGAATACCTGCAC
GAGGATTCGGTGCGCTGGGGTCTGCTCAACCTCGGCACCAACGCGCGTCCGTACTACAGCAGCAGCGTGGTGAACCGCGC
CAGCGCGTCGAAGTACGAAGGCGACACCTACTCGGTGTATGCGCAGGACAGCATCGAGTTCGTCAAGGACTGGAAGGTCG
TGCTCGGCGCCCGCCGCGACTTCATGGATGCCGAGTACAGCGCGGTCCGCTCGCCTGAGCTCAAGTTCAACGAGAACAGC
TACCGCGCCGGCCTGTCGTGGCAGCCGAGCGAGTACGCCCACTACTACCTGAGCTGGAGCGACTCGTTCAGCCCGACCGC
CGACCTCTACCAGCTCTCCGGCGGCGAATTCCCGCCCGAGCGTTCCGACGTGGTCGAACTCGGCGCCAAGTTCATGTTCT
TCGAAGGCGATCTCGCCTTCCGCACCGCGCTGTACCGCGCCACGAAGGACTGGGAACGCAACAACGACCTCGAGTCCACC
GCGTCCATCCTGACCCGCAAGCGTCGCACCGACGGTCTCGAGTTCGAACTTGCCGGCCGCATCACCGACAAGTGGGAAGT
GTTCGCCGGCCTCGCGCTGATGGACTCCGAGATCCTGAAGGTGGCGGTGAACCGCAACGCCACCACGGGCGTCGTCACCT
CGGCCAACCCCAACTTCAAGGGCGAGCGCGCGCGCAACACGCCGACCTACACCTTCAACTTCTGGTCGACCTACGCGCTG
GGCAACGGCTGGAAGGTGGGCGGCGGCGCCGAAGGCAAGGGCGAACGCTACGGCTACAACCCGTCCGCCGGCGGCACCGC
GGCGTTCAACCCGAACAAGGCGCCGGCCTACGTGCGCTGGGACGCGATGGTGGCCTACGAGCAGCCGAAGTGGGCGGTGC
GCCTGAACCTGCGCAACCTGTTCGACGAGGTCTATTACGATGCGATCTACGACAACGGCGGCTTTACGGTCCCCGGCACG
CGTCGCTCGGCCATCCTGACCACCGAGTTCAAGTTCTGA

Upstream 100 bases:

>100_bases
ACAAAAACCACCGCCGCGATTCGCCCCGAATCAGTAACCCAACAGCCAGCCAGCCTCGCGCAAGCCAGCCAGATTTTTCG
ACATTCGTATAAGGAACGAC

Downstream 100 bases:

>100_bases
TCCATCCCTGCATCACCCGCGGTGCCGCCCTCAGCGGCGCGCCGCGGGCGTTTCACCCCACCCTGCCGGAGGCTGCATGC
TGATCACGATCGACGACGTC

Product: putative TonB-dependent receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 732; Mature: 732

Protein sequence:

>732_residues
MKKKLARKPAAQAAAAPAQPVRLLPLGAALMAGGLSLSAMAQDTATPAPKEKALSAVTVNATTEAPPEDGYRATATRVGK
TLQDPHDVPQAITTVTRSLMEEQQVGSLKEALRNVSGLTFNAAEGGRSGDNMMLRGFYTYGDIYLDGIRDTAQYNRETFN
LEQVDVLRGAAAMLFGRGQAGGVINQVSKTPMLVDRNRVTGSVGTDDYRELTGDFNKVLGDTTAVRLNVMKRDEGSWRSN
PATGTEPEIHREGAAASIGFGLFTDNELIVSHQYLRTDDNPDYGISFDNATHKPTKRFDESDFWGIDQNFDESETNISTV
THTYRFTGKTQLRTQLRYSNYKRAYWASAPSNTVAPSDRGNAPKTRKSDTDNLVLQSDFSTEFNALGMKHELVTGIEYLH
EDSVRWGLLNLGTNARPYYSSSVVNRASASKYEGDTYSVYAQDSIEFVKDWKVVLGARRDFMDAEYSAVRSPELKFNENS
YRAGLSWQPSEYAHYYLSWSDSFSPTADLYQLSGGEFPPERSDVVELGAKFMFFEGDLAFRTALYRATKDWERNNDLEST
ASILTRKRRTDGLEFELAGRITDKWEVFAGLALMDSEILKVAVNRNATTGVVTSANPNFKGERARNTPTYTFNFWSTYAL
GNGWKVGGGAEGKGERYGYNPSAGGTAAFNPNKAPAYVRWDAMVAYEQPKWAVRLNLRNLFDEVYYDAIYDNGGFTVPGT
RRSAILTTEFKF

Sequences:

>Translated_732_residues
MKKKLARKPAAQAAAAPAQPVRLLPLGAALMAGGLSLSAMAQDTATPAPKEKALSAVTVNATTEAPPEDGYRATATRVGK
TLQDPHDVPQAITTVTRSLMEEQQVGSLKEALRNVSGLTFNAAEGGRSGDNMMLRGFYTYGDIYLDGIRDTAQYNRETFN
LEQVDVLRGAAAMLFGRGQAGGVINQVSKTPMLVDRNRVTGSVGTDDYRELTGDFNKVLGDTTAVRLNVMKRDEGSWRSN
PATGTEPEIHREGAAASIGFGLFTDNELIVSHQYLRTDDNPDYGISFDNATHKPTKRFDESDFWGIDQNFDESETNISTV
THTYRFTGKTQLRTQLRYSNYKRAYWASAPSNTVAPSDRGNAPKTRKSDTDNLVLQSDFSTEFNALGMKHELVTGIEYLH
EDSVRWGLLNLGTNARPYYSSSVVNRASASKYEGDTYSVYAQDSIEFVKDWKVVLGARRDFMDAEYSAVRSPELKFNENS
YRAGLSWQPSEYAHYYLSWSDSFSPTADLYQLSGGEFPPERSDVVELGAKFMFFEGDLAFRTALYRATKDWERNNDLEST
ASILTRKRRTDGLEFELAGRITDKWEVFAGLALMDSEILKVAVNRNATTGVVTSANPNFKGERARNTPTYTFNFWSTYAL
GNGWKVGGGAEGKGERYGYNPSAGGTAAFNPNKAPAYVRWDAMVAYEQPKWAVRLNLRNLFDEVYYDAIYDNGGFTVPGT
RRSAILTTEFKF
>Mature_732_residues
MKKKLARKPAAQAAAAPAQPVRLLPLGAALMAGGLSLSAMAQDTATPAPKEKALSAVTVNATTEAPPEDGYRATATRVGK
TLQDPHDVPQAITTVTRSLMEEQQVGSLKEALRNVSGLTFNAAEGGRSGDNMMLRGFYTYGDIYLDGIRDTAQYNRETFN
LEQVDVLRGAAAMLFGRGQAGGVINQVSKTPMLVDRNRVTGSVGTDDYRELTGDFNKVLGDTTAVRLNVMKRDEGSWRSN
PATGTEPEIHREGAAASIGFGLFTDNELIVSHQYLRTDDNPDYGISFDNATHKPTKRFDESDFWGIDQNFDESETNISTV
THTYRFTGKTQLRTQLRYSNYKRAYWASAPSNTVAPSDRGNAPKTRKSDTDNLVLQSDFSTEFNALGMKHELVTGIEYLH
EDSVRWGLLNLGTNARPYYSSSVVNRASASKYEGDTYSVYAQDSIEFVKDWKVVLGARRDFMDAEYSAVRSPELKFNENS
YRAGLSWQPSEYAHYYLSWSDSFSPTADLYQLSGGEFPPERSDVVELGAKFMFFEGDLAFRTALYRATKDWERNNDLEST
ASILTRKRRTDGLEFELAGRITDKWEVFAGLALMDSEILKVAVNRNATTGVVTSANPNFKGERARNTPTYTFNFWSTYAL
GNGWKVGGGAEGKGERYGYNPSAGGTAAFNPNKAPAYVRWDAMVAYEQPKWAVRLNLRNLFDEVYYDAIYDNGGFTVPGT
RRSAILTTEFKF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=713, Percent_Identity=27.2089761570827, Blast_Score=211, Evalue=9e-56,
Organism=Escherichia coli, GI1786344, Length=812, Percent_Identity=25, Blast_Score=126, Evalue=6e-30,
Organism=Escherichia coli, GI1787344, Length=762, Percent_Identity=23.753280839895, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 81183; Mature: 81183

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLARKPAAQAAAAPAQPVRLLPLGAALMAGGLSLSAMAQDTATPAPKEKALSAVTVN
CCCHHHCCCHHHHHCCCCCCEEEEECCHHHHHCCCCEEHHHHCCCCCCCHHHCCEEEEEE
ATTEAPPEDGYRATATRVGKTLQDPHDVPQAITTVTRSLMEEQQVGSLKEALRNVSGLTF
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
NAAEGGRSGDNMMLRGFYTYGDIYLDGIRDTAQYNRETFNLEQVDVLRGAAAMLFGRGQA
ECCCCCCCCCCEEEEEEEEECCEEEECCHHHHHHCCHHCCHHHHHHHHHHHHHEECCCCC
GGVINQVSKTPMLVDRNRVTGSVGTDDYRELTGDFNKVLGDTTAVRLNVMKRDEGSWRSN
CCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC
PATGTEPEIHREGAAASIGFGLFTDNELIVSHQYLRTDDNPDYGISFDNATHKPTKRFDE
CCCCCCCHHHHCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCEECCCCCCCCHHHCCC
SDFWGIDQNFDESETNISTVTHTYRFTGKTQLRTQLRYSNYKRAYWASAPSNTVAPSDRG
CCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
NAPKTRKSDTDNLVLQSDFSTEFNALGMKHELVTGIEYLHEDSVRWGLLNLGTNARPYYS
CCCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
SSVVNRASASKYEGDTYSVYAQDSIEFVKDWKVVLGARRDFMDAEYSAVRSPELKFNENS
HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCHHHHCCCHHHHHCCCCCEECCCC
YRAGLSWQPSEYAHYYLSWSDSFSPTADLYQLSGGEFPPERSDVVELGAKFMFFEGDLAF
EECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCHHH
RTALYRATKDWERNNDLESTASILTRKRRTDGLEFELAGRITDKWEVFAGLALMDSEILK
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEE
VAVNRNATTGVVTSANPNFKGERARNTPTYTFNFWSTYALGNGWKVGGGAEGKGERYGYN
EEECCCCCCEEEECCCCCCCCCCCCCCCCEEEECEEEEECCCCEEECCCCCCCCCCCCCC
PSAGGTAAFNPNKAPAYVRWDAMVAYEQPKWAVRLNLRNLFDEVYYDAIYDNGGFTVPGT
CCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHEECCCCEECCCC
RRSAILTTEFKF
CCCEEEEEECCC
>Mature Secondary Structure
MKKKLARKPAAQAAAAPAQPVRLLPLGAALMAGGLSLSAMAQDTATPAPKEKALSAVTVN
CCCHHHCCCHHHHHCCCCCCEEEEECCHHHHHCCCCEEHHHHCCCCCCCHHHCCEEEEEE
ATTEAPPEDGYRATATRVGKTLQDPHDVPQAITTVTRSLMEEQQVGSLKEALRNVSGLTF
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
NAAEGGRSGDNMMLRGFYTYGDIYLDGIRDTAQYNRETFNLEQVDVLRGAAAMLFGRGQA
ECCCCCCCCCCEEEEEEEEECCEEEECCHHHHHHCCHHCCHHHHHHHHHHHHHEECCCCC
GGVINQVSKTPMLVDRNRVTGSVGTDDYRELTGDFNKVLGDTTAVRLNVMKRDEGSWRSN
CCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC
PATGTEPEIHREGAAASIGFGLFTDNELIVSHQYLRTDDNPDYGISFDNATHKPTKRFDE
CCCCCCCHHHHCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCEECCCCCCCCHHHCCC
SDFWGIDQNFDESETNISTVTHTYRFTGKTQLRTQLRYSNYKRAYWASAPSNTVAPSDRG
CCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
NAPKTRKSDTDNLVLQSDFSTEFNALGMKHELVTGIEYLHEDSVRWGLLNLGTNARPYYS
CCCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
SSVVNRASASKYEGDTYSVYAQDSIEFVKDWKVVLGARRDFMDAEYSAVRSPELKFNENS
HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCHHHHCCCHHHHHCCCCCEECCCC
YRAGLSWQPSEYAHYYLSWSDSFSPTADLYQLSGGEFPPERSDVVELGAKFMFFEGDLAF
EECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCHHH
RTALYRATKDWERNNDLESTASILTRKRRTDGLEFELAGRITDKWEVFAGLALMDSEILK
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEE
VAVNRNATTGVVTSANPNFKGERARNTPTYTFNFWSTYALGNGWKVGGGAEGKGERYGYN
EEECCCCCCEEEECCCCCCCCCCCCCCCCEEEECEEEEECCCCEEECCCCCCCCCCCCCC
PSAGGTAAFNPNKAPAYVRWDAMVAYEQPKWAVRLNLRNLFDEVYYDAIYDNGGFTVPGT
CCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHEECCCCEECCCC
RRSAILTTEFKF
CCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]