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The map label for this gene is yebC [C]

Identifier: 119896865

GI number: 119896865

Start: 603781

End: 604506

Strand: Reverse

Name: yebC [C]

Synonym: azo0574

Alternate gene names: 119896865

Gene position: 604506-603781 (Counterclockwise)

Preceding gene: 119896868

Following gene: 119896864

Centisome position: 13.81

GC content: 64.88

Gene sequence:

>726_bases
ATGGCTGGTCATTCCAAATGGGCCAACATCCAGCACCGCAAGGGGCGCCAGGACGCCAAGCGGGGCAAGGTCTTCACCAA
GCTGATCAAGGAAGTCACCGTCGCCGCCAAGATGGGCGGGGGCGATCCTAACGCCAACCCGCGCCTGCGCCTGGCGATCG
ACAAGGCCAAGGCCGAGTCGATGCCCAAGGACAACATCGAGAACGCGATCAAGCGCGGCACCGGCCAGCTCGAAGGCGTG
ACCTACGAGGAAGCGCGCTACGAAGGCTATGGCATCGCCGGCGCCGCGGTGATGGTCGATTGCCTCACCGACAACAAGAC
CCGTACCGTGGCCGACGTGCGCCACGCGTTCTCCAAGTACGGCGGCAACATGGGCACCGACGGCTGCGTGGCCTTCCAGT
TCAAGCACTGCGGCCAGCTGATGTTCGCCCCCGGCACCGACGAGGACGCGCTGATGGAAGCCGCGCTGGAAGCCGGCGCC
GAGGACGTGGTTGCCAACGACGACGGCTCGATCGAGGTCATCACCGGGCCGTGGGAGTTCACCACGGTCAAGGAAACGCT
GGAAAAGGCGGGCTTCACCGCCGAATTCGGCGAAGTGACGATGAAGGCGCAGAACGAGACCGAACTCTCCGGCGACGACG
CCGCGCGCATGCAGAAGCTGCTCGACGCGCTCGAATCGCTCGACGACGTGCAGGAGGTCTATACCTCCGCGGTACTCGAC
GAGTAA

Upstream 100 bases:

>100_bases
TGGCTGCATGCAGCGCCGAATCTACCAGAGCGCGCCGGCAGTTGCCGTGCCGTCTGTATAATGGCGGGCTTCCATCGCAC
ACGGTTGCATCGAGGTTTAT

Downstream 100 bases:

>100_bases
GCACGCCCCATCCGGCCTGCAAAGCGGCGCCCGGCGCCGCTTTTTCGTTTCCGGCCCCGCCGGACCTCTCCCCCGCCAAC
CGCCCACCACCATCATGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGGDPNANPRLRLAIDKAKAESMPKDNIENAIKRGTGQLEGV
TYEEARYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKYGGNMGTDGCVAFQFKHCGQLMFAPGTDEDALMEAALEAGA
EDVVANDDGSIEVITGPWEFTTVKETLEKAGFTAEFGEVTMKAQNETELSGDDAARMQKLLDALESLDDVQEVYTSAVLD
E

Sequences:

>Translated_241_residues
MAGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGGDPNANPRLRLAIDKAKAESMPKDNIENAIKRGTGQLEGV
TYEEARYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKYGGNMGTDGCVAFQFKHCGQLMFAPGTDEDALMEAALEAGA
EDVVANDDGSIEVITGPWEFTTVKETLEKAGFTAEFGEVTMKAQNETELSGDDAARMQKLLDALESLDDVQEVYTSAVLD
E
>Mature_240_residues
AGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGGDPNANPRLRLAIDKAKAESMPKDNIENAIKRGTGQLEGVT
YEEARYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKYGGNMGTDGCVAFQFKHCGQLMFAPGTDEDALMEAALEAGAE
DVVANDDGSIEVITGPWEFTTVKETLEKAGFTAEFGEVTMKAQNETELSGDDAARMQKLLDALESLDDVQEVYTSAVLDE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=27.9835390946502, Blast_Score=107, Evalue=8e-24,
Organism=Escherichia coli, GI1788171, Length=234, Percent_Identity=55.5555555555556, Blast_Score=266, Evalue=1e-72,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=40.343347639485, Blast_Score=150, Evalue=6e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=248, Percent_Identity=26.6129032258064, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=31.8181818181818, Blast_Score=118, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24583305, Length=242, Percent_Identity=28.5123966942149, Blast_Score=99, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y574_AZOSB (A1K2Y6)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_932078.1
- ProteinModelPortal:   A1K2Y6
- SMR:   A1K2Y6
- STRING:   A1K2Y6
- GeneID:   4606456
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo0574
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   A1K2Y6
- ProtClustDB:   PRK00110
- BioCyc:   ASP62928:AZO0574-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26045; Mature: 25914

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGGDPNANPRLRLAIDKAKAES
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHC
MPKDNIENAIKRGTGQLEGVTYEEARYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKY
CCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
GGNMGTDGCVAFQFKHCGQLMFAPGTDEDALMEAALEAGAEDVVANDDGSIEVITGPWEF
CCCCCCCCEEEEEEHHCCCEEECCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCH
TTVKETLEKAGFTAEFGEVTMKAQNETELSGDDAARMQKLLDALESLDDVQEVYTSAVLD
HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
AGHSKWANIQHRKGRQDAKRGKVFTKLIKEVTVAAKMGGGDPNANPRLRLAIDKAKAES
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHC
MPKDNIENAIKRGTGQLEGVTYEEARYEGYGIAGAAVMVDCLTDNKTRTVADVRHAFSKY
CCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
GGNMGTDGCVAFQFKHCGQLMFAPGTDEDALMEAALEAGAEDVVANDDGSIEVITGPWEF
CCCCCCCCEEEEEEHHCCCEEECCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCH
TTVKETLEKAGFTAEFGEVTMKAQNETELSGDDAARMQKLLDALESLDDVQEVYTSAVLD
HHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA