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The map label for this gene is gstR2 [H]

Identifier: 119896868

GI number: 119896868

Start: 606869

End: 607759

Strand: Reverse

Name: gstR2 [H]

Synonym: azo0577

Alternate gene names: 119896868

Gene position: 607759-606869 (Counterclockwise)

Preceding gene: 119896872

Following gene: 119896865

Centisome position: 13.89

GC content: 71.38

Gene sequence:

>891_bases
ATGCGAACAATCAACTGGAACGACTGGTACGCCTTCGCCACCGTCGCGCAAAGCGGCAGCTTCACCCGCGCGGCCGAGCA
GCTCGACCTGCCGAAATCCTCGGTCAGCCACGCGGTGGCACGACTGGAACGCCAGCTCGGCCAGCGCCTGATCGAACGCA
GCACGCGCCGGCTGGCGCTGACCGAGCAGGGCGAGCGCATGCTGGCCCAGGTGCTGCCGCTGTTCGAACGGCTGGATGCG
GTGGCGGCCGAGGCCGGCGACGCGCGCGACGAACCGCAGGGCGTGCTGCGGATTGCCACGCCCTACGAGTTCGGCGCGAT
CCAGCTCGGCGAAGTGGTCAACGACGTGCTCAACCGCCATCCGCGGCTGCAGATCGAGATCGACGTCCGCATCCTCGGCG
CCGAGCCCGCGAGCGGCGGCTACGACGTGGTGTTCTTTGCCACCGGCGAGGCGCTGCCGGATTCCGAACGGGTGGTGCGC
CGGGTCTATAGCGTGGCCCGGGGGCTGTACGCAGCCCCCGCGCTGGTGCGCCGGCTGGGGTTGCCGCGCAGTGTGGCGGA
GCTGGAGGATTGGCCCTGCCTGTCGATGCCCGGTGAGGCGCGCTGGCACTTCGAAGCCGCCGACGGCCGCACCCACAGCG
TGCAGCCGCGCGGCCCGCTACGCACCACCAACGCCGCGTTGCGCCTGCAGGCGGCGATCGCCGGCCACGGCGCAACCATG
CTGGCCGCCTCGTACTGCCGGCGCGAACTCGAAGCGGGCACGCTGGTGCCGCTGCTGGCGGACCATGTGCCGCATCCGTT
GAAGATCTATGCCCATCTGCCCGGCCGCGGGCTGGTGCCCGCGCGGGCGCGCGTGTTCATGGACGCGATCGAGCGCTTCC
TGCGCGACTGA

Upstream 100 bases:

>100_bases
CGGCGGGGGGCGGAAAGGACGGGGGCGGAGGCGACATGCACGCAACTTACATTGTGCGTAGCATTGAATAAACATCTCGA
TATGTACGCTCTGTACAACC

Downstream 100 bases:

>100_bases
GCCGCACGCCCCCGGGGCCGCGAGGCGACGCCTGCCCTCAGCGCTTGCTGCCCAGCAGCGAGCCGAGCACACCACGCACG
ATCTGGCGGCCGAGCGAGCT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRTINWNDWYAFATVAQSGSFTRAAEQLDLPKSSVSHAVARLERQLGQRLIERSTRRLALTEQGERMLAQVLPLFERLDA
VAAEAGDARDEPQGVLRIATPYEFGAIQLGEVVNDVLNRHPRLQIEIDVRILGAEPASGGYDVVFFATGEALPDSERVVR
RVYSVARGLYAAPALVRRLGLPRSVAELEDWPCLSMPGEARWHFEAADGRTHSVQPRGPLRTTNAALRLQAAIAGHGATM
LAASYCRRELEAGTLVPLLADHVPHPLKIYAHLPGRGLVPARARVFMDAIERFLRD

Sequences:

>Translated_296_residues
MRTINWNDWYAFATVAQSGSFTRAAEQLDLPKSSVSHAVARLERQLGQRLIERSTRRLALTEQGERMLAQVLPLFERLDA
VAAEAGDARDEPQGVLRIATPYEFGAIQLGEVVNDVLNRHPRLQIEIDVRILGAEPASGGYDVVFFATGEALPDSERVVR
RVYSVARGLYAAPALVRRLGLPRSVAELEDWPCLSMPGEARWHFEAADGRTHSVQPRGPLRTTNAALRLQAAIAGHGATM
LAASYCRRELEAGTLVPLLADHVPHPLKIYAHLPGRGLVPARARVFMDAIERFLRD
>Mature_296_residues
MRTINWNDWYAFATVAQSGSFTRAAEQLDLPKSSVSHAVARLERQLGQRLIERSTRRLALTEQGERMLAQVLPLFERLDA
VAAEAGDARDEPQGVLRIATPYEFGAIQLGEVVNDVLNRHPRLQIEIDVRILGAEPASGGYDVVFFATGEALPDSERVVR
RVYSVARGLYAAPALVRRLGLPRSVAELEDWPCLSMPGEARWHFEAADGRTHSVQPRGPLRTTNAALRLQAAIAGHGATM
LAASYCRRELEAGTLVPLLADHVPHPLKIYAHLPGRGLVPARARVFMDAIERFLRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786401, Length=294, Percent_Identity=30.952380952381, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787589, Length=290, Percent_Identity=27.9310344827586, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI87081978, Length=292, Percent_Identity=24.6575342465753, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1789639, Length=293, Percent_Identity=27.3037542662116, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787128, Length=296, Percent_Identity=25.3378378378378, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1789440, Length=259, Percent_Identity=25.0965250965251, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI145693193, Length=289, Percent_Identity=27.3356401384083, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1786448, Length=262, Percent_Identity=25.5725190839695, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788748, Length=114, Percent_Identity=32.4561403508772, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789173, Length=251, Percent_Identity=26.2948207171315, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32708; Mature: 32708

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTINWNDWYAFATVAQSGSFTRAAEQLDLPKSSVSHAVARLERQLGQRLIERSTRRLAL
CCCCCCCCCEEEEHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEQGERMLAQVLPLFERLDAVAAEAGDARDEPQGVLRIATPYEFGAIQLGEVVNDVLNRH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
PRLQIEIDVRILGAEPASGGYDVVFFATGEALPDSERVVRRVYSVARGLYAAPALVRRLG
CCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LPRSVAELEDWPCLSMPGEARWHFEAADGRTHSVQPRGPLRTTNAALRLQAAIAGHGATM
CCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEHHHHCCCHHH
LAASYCRRELEAGTLVPLLADHVPHPLKIYAHLPGRGLVPARARVFMDAIERFLRD
HHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTINWNDWYAFATVAQSGSFTRAAEQLDLPKSSVSHAVARLERQLGQRLIERSTRRLAL
CCCCCCCCCEEEEHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEQGERMLAQVLPLFERLDAVAAEAGDARDEPQGVLRIATPYEFGAIQLGEVVNDVLNRH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
PRLQIEIDVRILGAEPASGGYDVVFFATGEALPDSERVVRRVYSVARGLYAAPALVRRLG
CCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LPRSVAELEDWPCLSMPGEARWHFEAADGRTHSVQPRGPLRTTNAALRLQAAIAGHGATM
CCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEHHHHCCCHHH
LAASYCRRELEAGTLVPLLADHVPHPLKIYAHLPGRGLVPARARVFMDAIERFLRD
HHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]