| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is fdxN [H]
Identifier: 119896833
GI number: 119896833
Start: 575735
End: 575938
Strand: Direct
Name: fdxN [H]
Synonym: azo0542
Alternate gene names: 119896833
Gene position: 575735-575938 (Clockwise)
Preceding gene: 119896832
Following gene: 119896834
Centisome position: 13.16
GC content: 60.78
Gene sequence:
>204_bases ATGGCTCTGAAGATTGTGCTGGACGAATGCACGTCCTGTGGTGACTGCAAGCCCGTCTGCCCGACCAAGTCGATCACCGA CAAGGGCGGCATTTTCAAGATCAACAAGGACACCTGTACCGAGTGCGAGGGCGATTTCGACGAGCCCCAGTGCCTGGCGG TCTGTCCCGCTGGTGACGCCTGTATCGTGCCGCTCGCGGCCTGA
Upstream 100 bases:
>100_bases ACGTCGAGCCGCTCGAAGCGCCTCCCAAGCTGCCGATCACGGTGCGCGCCAAGCGTGTGGATGCGCCCGAATAAGGGCGC GTTTTCCAGGAGAAGGAATC
Downstream 100 bases:
>100_bases TGCGAAAAAGGAGCCGCGCGTGCGCGGCTCCCTGTTTTTTGTAGCCCGCGTATCCCACGCCCGAATTCCCATGAGGCTCG TCATGAATACCGCTAGCCCG
Product: FdxN protein
Products: NA
Alternate protein names: Ferredoxin I; FdI [H]
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MALKIVLDECTSCGDCKPVCPTKSITDKGGIFKINKDTCTECEGDFDEPQCLAVCPAGDACIVPLAA
Sequences:
>Translated_67_residues MALKIVLDECTSCGDCKPVCPTKSITDKGGIFKINKDTCTECEGDFDEPQCLAVCPAGDACIVPLAA >Mature_66_residues ALKIVLDECTSCGDCKPVCPTKSITDKGGIFKINKDTCTECEGDFDEPQCLAVCPAGDACIVPLAA
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin probably participates in nitrogen fixation [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 6997; Mature: 6866
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 14.9 %Cys+Met (Translated Protein) 13.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 13.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKIVLDECTSCGDCKPVCPTKSITDKGGIFKINKDTCTECEGDFDEPQCLAVCPAGDA CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCE CIVPLAA EEEEECC >Mature Secondary Structure ALKIVLDECTSCGDCKPVCPTKSITDKGGIFKINKDTCTECEGDFDEPQCLAVCPAGDA EEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCE CIVPLAA EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2315024; 2681157; 2277040; 1847145 [H]