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The map label for this gene is nifY1 [H]

Identifier: 119896834

GI number: 119896834

Start: 576021

End: 576743

Strand: Direct

Name: nifY1 [H]

Synonym: azo0543

Alternate gene names: 119896834

Gene position: 576021-576743 (Clockwise)

Preceding gene: 119896833

Following gene: 119896835

Centisome position: 13.16

GC content: 68.33

Gene sequence:

>723_bases
ATGAATACCGCTAGCCCGACCGGAAGTCCCGTCACCCGGGAAGCCGCCCTGCGTATCGCGATGGCAGCACGCGCGCTGCC
CGGTGTCGAGGTCGTCGCCTTCGTGCGCGCGCTCGGCGACCGCCTGGGGCTGCCTGTCACCGACGAAAAGCTCGCCCGCG
TCACCGTCGAGGATCTGAAGGCCCTGCTGCAGGGCGACGAGATCGTCGATCCGGGAGTCGAGTCGTCGGCGCTCAAGGCC
GCCGTGCGTTTTCTGTGGGGCGAAGGCCTCGATGACGGCCAACCCACCCCCGATGCCGACGTGCCTGCCGCCGAGGGCGC
GTTGAAGGTGGCGGTGGCCTCGAACACCGGCGAACTGCTCGATGGCCACTTTGGCTCCTGCGCGCGTTTCCTGGTTTATC
AGGTCAGTGAGGAAGGCGTCTGGCTGATCGACGTGCGCTCCACCGAGGGCACCGACGACGCCGACGACCGCAATGTCGCG
CGCGCCGCCTTGATCAACGATTGTCATCTCGCCTACATGCAGTCGATCGGCGGCCCGGCCGCGGCCAAGATCGTGCGCGC
CGGCATTCACCCGGTGAAGTTCCCGGTTGGCGGCGAAGCCCGCCAGGTGCTTGCACAGCTGCAGGGCACGCTGAAGCGCC
CTCCGCCGTGGCTGGCCAAGGTGCTGGGCCGTGAAGCGCCCAGCCTCGCGCAGTTCACTTCCGACGAGGAGGCCGAAGCA
TGA

Upstream 100 bases:

>100_bases
GTGCCGCTCGCGGCCTGATGCGAAAAAGGAGCCGCGCGTGCGCGGCTCCCTGTTTTTTGTAGCCCGCGTATCCCACGCCC
GAATTCCCATGAGGCTCGTC

Downstream 100 bases:

>100_bases
TCAACGATGAACTGCTGGGCACCGTCGCCGGGCTGGTGAAGGAGCAGGGCGCCAGCGAGCAGCTGGTCAGCGCGCTGCGG
GTGCGCTGGCCCAACCTGCG

Product: NifY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNTASPTGSPVTREAALRIAMAARALPGVEVVAFVRALGDRLGLPVTDEKLARVTVEDLKALLQGDEIVDPGVESSALKA
AVRFLWGEGLDDGQPTPDADVPAAEGALKVAVASNTGELLDGHFGSCARFLVYQVSEEGVWLIDVRSTEGTDDADDRNVA
RAALINDCHLAYMQSIGGPAAAKIVRAGIHPVKFPVGGEARQVLAQLQGTLKRPPPWLAKVLGREAPSLAQFTSDEEAEA

Sequences:

>Translated_240_residues
MNTASPTGSPVTREAALRIAMAARALPGVEVVAFVRALGDRLGLPVTDEKLARVTVEDLKALLQGDEIVDPGVESSALKA
AVRFLWGEGLDDGQPTPDADVPAAEGALKVAVASNTGELLDGHFGSCARFLVYQVSEEGVWLIDVRSTEGTDDADDRNVA
RAALINDCHLAYMQSIGGPAAAKIVRAGIHPVKFPVGGEARQVLAQLQGTLKRPPPWLAKVLGREAPSLAQFTSDEEAEA
>Mature_240_residues
MNTASPTGSPVTREAALRIAMAARALPGVEVVAFVRALGDRLGLPVTDEKLARVTVEDLKALLQGDEIVDPGVESSALKA
AVRFLWGEGLDDGQPTPDADVPAAEGALKVAVASNTGELLDGHFGSCARFLVYQVSEEGVWLIDVRSTEGTDDADDRNVA
RAALINDCHLAYMQSIGGPAAAKIVRAGIHPVKFPVGGEARQVLAQLQGTLKRPPPWLAKVLGREAPSLAQFTSDEEAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifX/nifY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co [H]

EC number: NA

Molecular weight: Translated: 25211; Mature: 25211

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTASPTGSPVTREAALRIAMAARALPGVEVVAFVRALGDRLGLPVTDEKLARVTVEDLK
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALLQGDEIVDPGVESSALKAAVRFLWGEGLDDGQPTPDADVPAAEGALKVAVASNTGELL
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHH
DGHFGSCARFLVYQVSEEGVWLIDVRSTEGTDDADDRNVARAALINDCHLAYMQSIGGPA
CCCHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAKIVRAGIHPVKFPVGGEARQVLAQLQGTLKRPPPWLAKVLGREAPSLAQFTSDEEAEA
HHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MNTASPTGSPVTREAALRIAMAARALPGVEVVAFVRALGDRLGLPVTDEKLARVTVEDLK
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALLQGDEIVDPGVESSALKAAVRFLWGEGLDDGQPTPDADVPAAEGALKVAVASNTGELL
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHH
DGHFGSCARFLVYQVSEEGVWLIDVRSTEGTDDADDRNVARAALINDCHLAYMQSIGGPA
CCCHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
AAKIVRAGIHPVKFPVGGEARQVLAQLQGTLKRPPPWLAKVLGREAPSLAQFTSDEEAEA
HHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2644218 [H]