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The map label for this gene is yoaB [C]

Identifier: 119896772

GI number: 119896772

Start: 520972

End: 521325

Strand: Reverse

Name: yoaB [C]

Synonym: azo0481

Alternate gene names: 119896772

Gene position: 521325-520972 (Counterclockwise)

Preceding gene: 119896773

Following gene: 119896771

Centisome position: 11.91

GC content: 70.06

Gene sequence:

>354_bases
ATGCAGCCCATCGTGCGCAAGGGCGTCACCGCCCGCTATGCCGACGCAGTGATCCACAACCAGACGGTCTACCTCGTCGA
GGTGCCGAGCAGCACCGGCGGCGACGTCACTACCCAGGCCGGTGAGATCTTCGCCAGCCTGGAACGGCAACTGATGGACG
CCGGCAGCAGCAAGGCACGCATCCTGATGGCCACGGTCTACCTCACCGACATGGCGGACTACGACGCGATGAACGCGGCC
TGGGAAGCCTGGCTGCCGCCCGGCGAGGCGCCGTCGCGGGCGTGCGTGCGCGTGGCCGGGCTGGCGCAAGCCGGCTGGCG
CATCGAGATCGCGCTCACCGCGGCCGTCGCGTGA

Upstream 100 bases:

>100_bases
GGATGGCGATCGGCAAGGGCGCGCGCTACGCCGCGATCGCCTGGCTGCTGGGCTGAGCGGCGGCGGTATACTGGGCGGTC
CCCTCCCCCGGAAGACAACG

Downstream 100 bases:

>100_bases
AACCCTCCCCGGGCGCTGGGCAACAAGCCCGCACCCCACATAAGGTCTTGATTTCTGCTGCGTGTTGCACTGCGGTTCGA
TAGAATCGCGGGTTCCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MQPIVRKGVTARYADAVIHNQTVYLVEVPSSTGGDVTTQAGEIFASLERQLMDAGSSKARILMATVYLTDMADYDAMNAA
WEAWLPPGEAPSRACVRVAGLAQAGWRIEIALTAAVA

Sequences:

>Translated_117_residues
MQPIVRKGVTARYADAVIHNQTVYLVEVPSSTGGDVTTQAGEIFASLERQLMDAGSSKARILMATVYLTDMADYDAMNAA
WEAWLPPGEAPSRACVRVAGLAQAGWRIEIALTAAVA
>Mature_117_residues
MQPIVRKGVTARYADAVIHNQTVYLVEVPSSTGGDVTTQAGEIFASLERQLMDAGSSKARILMATVYLTDMADYDAMNAA
WEAWLPPGEAPSRACVRVAGLAQAGWRIEIALTAAVA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=113, Percent_Identity=42.4778761061947, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12468; Mature: 12468

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPIVRKGVTARYADAVIHNQTVYLVEVPSSTGGDVTTQAGEIFASLERQLMDAGSSKAR
CCCCHHCCCCHHHHHHEEECCEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCE
ILMATVYLTDMADYDAMNAAWEAWLPPGEAPSRACVRVAGLAQAGWRIEIALTAAVA
EEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQPIVRKGVTARYADAVIHNQTVYLVEVPSSTGGDVTTQAGEIFASLERQLMDAGSSKAR
CCCCHHCCCCHHHHHHEEECCEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCE
ILMATVYLTDMADYDAMNAAWEAWLPPGEAPSRACVRVAGLAQAGWRIEIALTAAVA
EEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA