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The map label for this gene is yqaA [H]

Identifier: 119896773

GI number: 119896773

Start: 521370

End: 521783

Strand: Reverse

Name: yqaA [H]

Synonym: azo0482

Alternate gene names: 119896773

Gene position: 521783-521370 (Counterclockwise)

Preceding gene: 119896775

Following gene: 119896772

Centisome position: 11.92

GC content: 73.19

Gene sequence:

>414_bases
ATGGAACTGATCGCCGCAGCTGAGCCGGCCACCACGCTCGGCGCCCTGTTCATCAGCGCCCTGCTGGCCGCCACTGTCTT
GCCCGGCGGTTCGGAAGCGGCCTTCGCCGCACTGCTGCTCGCCAGCCCCCAGTTGCTATGGCCTGCGCTCGCGGCGGCGA
CGCTGGGCAACACCCTGGGCGGCACGAGCACCTACCTGCTCGGGCGCCTGCTGCCGCGCAAGGAAGTGCCGCCGCGGCTG
GCGCTGGTGCGGCGCTACGGCAGCCTCAGCCTGCTGCTGTCGTGGGTGCCGCTGATCGGCGACGCGCTATGCGCCGGCGC
GGGCCTGCTGCGCCTGCCGTGGCTGCCCTGCCTGCTTTGGATGGCGATCGGCAAGGGCGCGCGCTACGCCGCGATCGCCT
GGCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
CGACGAGGATCCCAGAGGACAACGGCGGAACGCGCCGGATTCTGCATTTGTCATATTTCCATGTCAATGACATGGTCATT
GTCGACGCCGCCGCACCGGC

Downstream 100 bases:

>100_bases
GCGGCGGCGGTATACTGGGCGGTCCCCTCCCCCGGAAGACAACGATGCAGCCCATCGTGCGCAAGGGCGTCACCGCCCGC
TATGCCGACGCAGTGATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MELIAAAEPATTLGALFISALLAATVLPGGSEAAFAALLLASPQLLWPALAAATLGNTLGGTSTYLLGRLLPRKEVPPRL
ALVRRYGSLSLLLSWVPLIGDALCAGAGLLRLPWLPCLLWMAIGKGARYAAIAWLLG

Sequences:

>Translated_137_residues
MELIAAAEPATTLGALFISALLAATVLPGGSEAAFAALLLASPQLLWPALAAATLGNTLGGTSTYLLGRLLPRKEVPPRL
ALVRRYGSLSLLLSWVPLIGDALCAGAGLLRLPWLPCLLWMAIGKGARYAAIAWLLG
>Mature_137_residues
MELIAAAEPATTLGALFISALLAATVLPGGSEAAFAALLLASPQLLWPALAAATLGNTLGGTSTYLLGRLLPRKEVPPRL
ALVRRYGSLSLLLSWVPLIGDALCAGAGLLRLPWLPCLLWMAIGKGARYAAIAWLLG

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=130, Percent_Identity=40, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 14170; Mature: 14170

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIAAAEPATTLGALFISALLAATVLPGGSEAAFAALLLASPQLLWPALAAATLGNTLG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
GTSTYLLGRLLPRKEVPPRLALVRRYGSLSLLLSWVPLIGDALCAGAGLLRLPWLPCLLW
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MAIGKGARYAAIAWLLG
HHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MELIAAAEPATTLGALFISALLAATVLPGGSEAAFAALLLASPQLLWPALAAATLGNTLG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
GTSTYLLGRLLPRKEVPPRLALVRRYGSLSLLLSWVPLIGDALCAGAGLLRLPWLPCLLW
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
MAIGKGARYAAIAWLLG
HHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]