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The map label for this gene is yjnA [H]

Identifier: 119896724

GI number: 119896724

Start: 458559

End: 459338

Strand: Reverse

Name: yjnA [H]

Synonym: azo0433

Alternate gene names: 119896724

Gene position: 459338-458559 (Counterclockwise)

Preceding gene: 119896727

Following gene: 119896723

Centisome position: 10.5

GC content: 70.38

Gene sequence:

>780_bases
ATGGACTTTGCCTATACCGTCGCCGGATTCGCCGTCGGCGCCATCGTCGGTCTCACCGGCGTTGGCGGCGGCTCGCTGAT
GACGCCGCTGCTGGTGCTGCTGTTCGGCATCCACCCCTCGGTGGCGGTGGGTACCGACCTGCTTTACGCGGCGATCACCA
AGGCGGGCGGCACCGTGGCCCACGGCCTCAAGGGCACGGTGGATTGGACCGTGACGCGCCGGCTCGCGAGCGGTAGCATC
CCGGCCGCGGCGCTGACCCTGGTGCTGGTGGGCACCTTCGCCCCCGGCGGCATGGCCGGTGCCACCGGGCTGATCAAGGT
CGCGCTGGGCGTGGCGCTGCTGCTCACCGCCGTCGCGCTGATCTTCCGCAAGCAGATCCAGGCGTACGCGGCGTCGCGTT
TCGGCGACGAACCGAATCCGCAGCGCACCGCGTGGCTCACCGTCGTCGTCGGCGCGGTGCTTGGCGTGCTGGTGTCGATC
TCGTCGGTGGGCGCCGGCGCGCTCGGCGTCACCGCGCTGTTCTTCCTGTACCCCAAGATGCCCGCGCTGCGCATCGTCGG
TTCGGACATCGCCCACGCGGTGCCGCTGACGCTGGTGGCCGGCATCGGCCACTGGATCCTGGGCAGCGTCGACTGGTTCC
TGCTCGGCAGCCTGATCGTCGGCTCCCTGCCCGGGATCTGGCTCGGCAGCCATATTTCGACCAAGGTGCCGGACCGGGTG
CTGCGCCCCATCCTCGCCACCATGCTGGTGCTGGTGGGCGCCAAGCTGATCGGCCACTGA

Upstream 100 bases:

>100_bases
AAACCTTAATAACCAATTCTTCTTAAAGTCTAACGCATAGGCTCTTTTTGAACTAAACAGGTCGGTCTACGATGCGCCGC
AACATCAAGGAAGCCTGTCC

Downstream 100 bases:

>100_bases
ACATCCGCGGGCGGCATTGCCGTCCGCACCCGAACTCAACGAGAGAGACGCGATGTACCGATACGACGATTACGACCAGC
GCCTGGTGGATGAACGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDFAYTVAGFAVGAIVGLTGVGGGSLMTPLLVLLFGIHPSVAVGTDLLYAAITKAGGTVAHGLKGTVDWTVTRRLASGSI
PAAALTLVLVGTFAPGGMAGATGLIKVALGVALLLTAVALIFRKQIQAYAASRFGDEPNPQRTAWLTVVVGAVLGVLVSI
SSVGAGALGVTALFFLYPKMPALRIVGSDIAHAVPLTLVAGIGHWILGSVDWFLLGSLIVGSLPGIWLGSHISTKVPDRV
LRPILATMLVLVGAKLIGH

Sequences:

>Translated_259_residues
MDFAYTVAGFAVGAIVGLTGVGGGSLMTPLLVLLFGIHPSVAVGTDLLYAAITKAGGTVAHGLKGTVDWTVTRRLASGSI
PAAALTLVLVGTFAPGGMAGATGLIKVALGVALLLTAVALIFRKQIQAYAASRFGDEPNPQRTAWLTVVVGAVLGVLVSI
SSVGAGALGVTALFFLYPKMPALRIVGSDIAHAVPLTLVAGIGHWILGSVDWFLLGSLIVGSLPGIWLGSHISTKVPDRV
LRPILATMLVLVGAKLIGH
>Mature_259_residues
MDFAYTVAGFAVGAIVGLTGVGGGSLMTPLLVLLFGIHPSVAVGTDLLYAAITKAGGTVAHGLKGTVDWTVTRRLASGSI
PAAALTLVLVGTFAPGGMAGATGLIKVALGVALLLTAVALIFRKQIQAYAASRFGDEPNPQRTAWLTVVVGAVLGVLVSI
SSVGAGALGVTALFFLYPKMPALRIVGSDIAHAVPLTLVAGIGHWILGSVDWFLLGSLIVGSLPGIWLGSHISTKVPDRV
LRPILATMLVLVGAKLIGH

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26271; Mature: 26271

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]