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The map label for this gene is qseB1 [H]

Identifier: 119896555

GI number: 119896555

Start: 291680

End: 292336

Strand: Reverse

Name: qseB1 [H]

Synonym: azo0264

Alternate gene names: 119896555

Gene position: 292336-291680 (Counterclockwise)

Preceding gene: 119896562

Following gene: 119896554

Centisome position: 6.68

GC content: 72.75

Gene sequence:

>657_bases
ATGCGGATACTGCTGGTGGAAGACGATGCCCTGCTGGGCGACGGCCTGCAGGCGGGCCTGCGGCTGGCCGGCTTCAATGC
GGACTGGGTACGCAGCGCGGAGGCCGCGGAGACGGCGCTGGCGCTGGAGCATTTCTCGGCAGTGGTGCTCGACCTCGGCC
TGCCGGGGCGCGACGGCAACAGCCTGCTCGCGGCGCTGCGCCAGCGCCATGACGACATCCCGGTGCTGATCCTGACCGCG
CGCGACGCCGTCGCCGACAAGGTGCGCGGGCTGGACCTCGGCGCCGACGACTACATGGTGAAGCCGGTCGATCTCGACGA
ACTCGCGGCCCGCCTGCGCGCGGCGCTGCGGCGCGCCGGAGGCCGCGCCAGCGGAGTCATCCGCCACGGCGAGGTCGAAC
TCGACCCCGCGGCGCGCCGGGTCCGCCGCGCCGGCGCGGAGGTGGCGCTGACCAGCCGCGAATTCGACCTGCTCTACGTG
CTGCTGTCGCGCGCCGGCACCGTGCTGACGCGGCGCATGCTGGACGAGCAGCTGTATGCCTGGGATGAAGGCGCCGAGAG
CAACACGCTGGAGGTCCACATCCACCACCTGCGGCGCAAGCTCGGCGCCGACCTCATCCACACCGTGCGCGGCGTGGGCT
ACACGGTGCCGGCATGA

Upstream 100 bases:

>100_bases
CTTGATTAATGGCCGCTTAAGCCGGCGCGGCGCAAAGTGTCGATGTGTAAGCGCCGGCGCGGACCGCCGGGCGCTTGAAG
CGGGCGGCATGAGGACGGAG

Downstream 100 bases:

>100_bases
GCGCGGACGCGCTGCCGCTGCCCGGCTGGTCACTGAAGCGGCGGCTGCTCGGCCTGCTGCTGCTGGTGGCCGGCGGCGTG
TCGGCGCTGACCATCGTGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRILLVEDDALLGDGLQAGLRLAGFNADWVRSAEAAETALALEHFSAVVLDLGLPGRDGNSLLAALRQRHDDIPVLILTA
RDAVADKVRGLDLGADDYMVKPVDLDELAARLRAALRRAGGRASGVIRHGEVELDPAARRVRRAGAEVALTSREFDLLYV
LLSRAGTVLTRRMLDEQLYAWDEGAESNTLEVHIHHLRRKLGADLIHTVRGVGYTVPA

Sequences:

>Translated_218_residues
MRILLVEDDALLGDGLQAGLRLAGFNADWVRSAEAAETALALEHFSAVVLDLGLPGRDGNSLLAALRQRHDDIPVLILTA
RDAVADKVRGLDLGADDYMVKPVDLDELAARLRAALRRAGGRASGVIRHGEVELDPAARRVRRAGAEVALTSREFDLLYV
LLSRAGTVLTRRMLDEQLYAWDEGAESNTLEVHIHHLRRKLGADLIHTVRGVGYTVPA
>Mature_218_residues
MRILLVEDDALLGDGLQAGLRLAGFNADWVRSAEAAETALALEHFSAVVLDLGLPGRDGNSLLAALRQRHDDIPVLILTA
RDAVADKVRGLDLGADDYMVKPVDLDELAARLRAALRRAGGRASGVIRHGEVELDPAARRVRRAGAEVALTSREFDLLYV
LLSRAGTVLTRRMLDEQLYAWDEGAESNTLEVHIHHLRRKLGADLIHTVRGVGYTVPA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. Currently it is not known whether this effect is direct or not [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=52.7777777777778, Blast_Score=228, Evalue=2e-61,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=48.1651376146789, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=37.3873873873874, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1786784, Length=219, Percent_Identity=36.0730593607306, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=38.3561643835616, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=37.8995433789954, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=35.8407079646018, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=35, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=36.1233480176211, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=34.9557522123894, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=34.0909090909091, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=29.9107142857143, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=27.1929824561404, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=27.9475982532751, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=37.719298245614, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=128, Percent_Identity=32.8125, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=32.4561403508772, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 23733; Mature: 23733

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDALLGDGLQAGLRLAGFNADWVRSAEAAETALALEHFSAVVLDLGLPGRDGN
CEEEEECCCCHHCCCHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
SLLAALRQRHDDIPVLILTARDAVADKVRGLDLGADDYMVKPVDLDELAARLRAALRRAG
HHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
GRASGVIRHGEVELDPAARRVRRAGAEVALTSREFDLLYVLLSRAGTVLTRRMLDEQLYA
CCCCCEEECCCEEECHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WDEGAESNTLEVHIHHLRRKLGADLIHTVRGVGYTVPA
CCCCCCCCEEEEHHHHHHHHHCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRILLVEDDALLGDGLQAGLRLAGFNADWVRSAEAAETALALEHFSAVVLDLGLPGRDGN
CEEEEECCCCHHCCCHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
SLLAALRQRHDDIPVLILTARDAVADKVRGLDLGADDYMVKPVDLDELAARLRAALRRAG
HHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCC
GRASGVIRHGEVELDPAARRVRRAGAEVALTSREFDLLYVLLSRAGTVLTRRMLDEQLYA
CCCCCEEECCCEEECHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WDEGAESNTLEVHIHHLRRKLGADLIHTVRGVGYTVPA
CCCCCCCCEEEEHHHHHHHHHCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]