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The map label for this gene is ndpA [C]

Identifier: 119896481

GI number: 119896481

Start: 210838

End: 211857

Strand: Direct

Name: ndpA [C]

Synonym: azo0190

Alternate gene names: 119896481

Gene position: 210838-211857 (Clockwise)

Preceding gene: 119896478

Following gene: 119896482

Centisome position: 4.82

GC content: 62.35

Gene sequence:

>1020_bases
ATGTCCACCGATCAAATTATTACTCAGCTGTTGATTCACCGTCTGGTAAAGGCCGGTGATGCAGCCGCGCGTATCGTGCA
GCGCGACCGATTGAATTCCCCCGACGCCGCGGCCATCGGATTGGTCACCCAACTGATATCGACCTTTACCCAACGCTCGG
GCAAGTGCCACGGTACGTTCGAAGACGACGAGGAGGAGTTTCCGGTCGCCCGCCTTCTGCGCGAATTTTCGGGCGATGAC
GAGCGTGGTTTCATCGACCTCGGTGCCCACCTCTCAGATCATCTTCGCAACTGTGCGGATTTGGTTGGTTTGGATAACGG
TGGGGCATTTCTTCTCGCCCGCGTTCGTGAACAGGCGGTGGACTGGTTGTGGATCGCGCTAGTGCCTGAAACGGTAACCA
CTGCCGTCGATAAGGACCTGAACCTGCACGAACATACGCACCTGGACGTTCATGCGACCCAGGCGGTGGCGCGGATCGAC
TTGACCGGATGGCGGCGGGGCGACGAACGTTGCGTGGCGTTCCTCAGCGGCCGCGGGCCGGCCGCCCAGTGCTTTCGGCG
CTTCCTGGGCTGCAAGGATGTCGTCGTGGCCTTGCAGGAAACCCGCAAGCTGGTGCAAGCGCTTACCGACTTCGCCGATT
CGGAGCGACTGGATCCGCCTGTACGCGACGAAATGATGGAGCGCGCGCATCGCTATCTGGATGATCTCGGCGAGGCGGGG
GCGCCGGTTGAGCTTGACGCATTGGCCAGCGAGCTATGGCCTAGCGCGCCAGCGCGACTCGGGACGACACTTCAGACGCC
GGCGAGGGCCTTGGCACCTGCGTTTGTGCCCAACCGCCGGGCATTGAAACCGCTTGTACGCCTTAGCGCCAGCGCGGACC
AGTGGCGCGTGGAGTTCGAACGCGCCGGCTTGCGGTCGGGCGCGGTCAGCTACGACGTGGTGTCCGATACCCTGGTGCTG
TCGAACCTCCCGCCCTATCTGAAGCAGATGTTGATCGACGACGGGGATGCGTCCTCGTAA

Upstream 100 bases:

>100_bases
ACGAGTTTCTCCAGCGCAGTGAGAATAGGCGTGGGGGCTGAAACGGACCGGAAATGCAATCAGAACCGCCCGGGTTTTCC
CGCCTATCAGGGATTGGAAC

Downstream 100 bases:

>100_bases
GGCCGTTCGGAAGGGCTGGCTTGACAGCTTAAATTACGACTGTAATATAAAAGCGTCCCCAACTGGAAAGCCACCATGAC
CGAGACCCCACCCCAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSTDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTFEDDEEEFPVARLLREFSGDD
ERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAVDWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARID
LTGWRRGDERCVAFLSGRGPAAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDLGEAG
APVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWRVEFERAGLRSGAVSYDVVSDTLVL
SNLPPYLKQMLIDDGDASS

Sequences:

>Translated_339_residues
MSTDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTFEDDEEEFPVARLLREFSGDD
ERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAVDWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARID
LTGWRRGDERCVAFLSGRGPAAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDLGEAG
APVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWRVEFERAGLRSGAVSYDVVSDTLVL
SNLPPYLKQMLIDDGDASS
>Mature_338_residues
STDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTFEDDEEEFPVARLLREFSGDDE
RGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAVDWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARIDL
TGWRRGDERCVAFLSGRGPAAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDLGEAGA
PVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWRVEFERAGLRSGAVSYDVVSDTLVLS
NLPPYLKQMLIDDGDASS

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=335, Percent_Identity=27.4626865671642, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 37350; Mature: 37218

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTF
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
EDDEEEFPVARLLREFSGDDERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAV
CCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARIDLTGWRRGDERCVAFLSGRGP
HHHHEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH
AAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDLGEAG
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
APVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWRVEFE
CCEEHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
RAGLRSGAVSYDVVSDTLVLSNLPPYLKQMLIDDGDASS
HCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STDQIITQLLIHRLVKAGDAAARIVQRDRLNSPDAAAIGLVTQLISTFTQRSGKCHGTF
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
EDDEEEFPVARLLREFSGDDERGFIDLGAHLSDHLRNCADLVGLDNGGAFLLARVREQAV
CCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DWLWIALVPETVTTAVDKDLNLHEHTHLDVHATQAVARIDLTGWRRGDERCVAFLSGRGP
HHHHEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH
AAQCFRRFLGCKDVVVALQETRKLVQALTDFADSERLDPPVRDEMMERAHRYLDDLGEAG
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
APVELDALASELWPSAPARLGTTLQTPARALAPAFVPNRRALKPLVRLSASADQWRVEFE
CCEEHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
RAGLRSGAVSYDVVSDTLVLSNLPPYLKQMLIDDGDASS
HCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12547188 [H]