Click here to switch to the map view.

The map label for this gene is ydeM [H]

Identifier: 119896482

GI number: 119896482

Start: 211933

End: 212409

Strand: Direct

Name: ydeM [H]

Synonym: azo0191

Alternate gene names: 119896482

Gene position: 211933-212409 (Clockwise)

Preceding gene: 119896481

Following gene: 119896483

Centisome position: 4.84

GC content: 66.04

Gene sequence:

>477_bases
ATGACCGAGACCCCACCCCAGCGAGGAGCGCCGCTGTATCTGGACGACCTGCAGGTTGGTCTGCGCTTCGGCAGCGGCAC
CCATCCGATTGACGCCCAGCAGATCACCGCTTTCGCGGACAGCTTCGATCCGCAGCCTTTCCATCTGGATCACGAGGCCG
CGCAGGATTCCCTGTTCGGTGGACTTGCGGCAAGTGGCTGGCACACGGCCGCGATCACCATGCGCTTGCTCGTGGAGGGT
GGGCTGCCGATTGCCGGCGGCATCATCGGCGCCGGGGCAGAGGTCACCTGGCCGAGGCCGACGCGTCCCGGGGATGTGCT
GCAGGTCGACAGCGAAGTGCTCGAAATCACCCCGTCGCGATCCAAGCCGGACAGGGGCATCGTCACGCTCCGTAGCGAAA
CCCGCAACCAGCGCGGCGAAATCCTGCAGGTGCTGACCTCCCGCCTGGTCGTACCACGTCGTCCGCTGAATGGATAG

Upstream 100 bases:

>100_bases
CGACGACGGGGATGCGTCCTCGTAAGGCCGTTCGGAAGGGCTGGCTTGACAGCTTAAATTACGACTGTAATATAAAAGCG
TCCCCAACTGGAAAGCCACC

Downstream 100 bases:

>100_bases
CTCGCGACAGCGGGAGGCCTTCTCCACCGACGTGCTGCAGGCGGCGCCCTACCCGGTTGCCATCATCGGCGCCGGAGCGC
TCGGCCTGTCGCTGGCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTETPPQRGAPLYLDDLQVGLRFGSGTHPIDAQQITAFADSFDPQPFHLDHEAAQDSLFGGLAASGWHTAAITMRLLVEG
GLPIAGGIIGAGAEVTWPRPTRPGDVLQVDSEVLEITPSRSKPDRGIVTLRSETRNQRGEILQVLTSRLVVPRRPLNG

Sequences:

>Translated_158_residues
MTETPPQRGAPLYLDDLQVGLRFGSGTHPIDAQQITAFADSFDPQPFHLDHEAAQDSLFGGLAASGWHTAAITMRLLVEG
GLPIAGGIIGAGAEVTWPRPTRPGDVLQVDSEVLEITPSRSKPDRGIVTLRSETRNQRGEILQVLTSRLVVPRRPLNG
>Mature_157_residues
TETPPQRGAPLYLDDLQVGLRFGSGTHPIDAQQITAFADSFDPQPFHLDHEAAQDSLFGGLAASGWHTAAITMRLLVEGG
LPIAGGIIGAGAEVTWPRPTRPGDVLQVDSEVLEITPSRSKPDRGIVTLRSETRNQRGEILQVLTSRLVVPRRPLNG

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17008; Mature: 16877

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETPPQRGAPLYLDDLQVGLRFGSGTHPIDAQQITAFADSFDPQPFHLDHEAAQDSLFG
CCCCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
GLAASGWHTAAITMRLLVEGGLPIAGGIIGAGAEVTWPRPTRPGDVLQVDSEVLEITPSR
CCCCCCCHHHHHHHHHHHHCCCCEECCEEECCCEEECCCCCCCCCEEEECCCEEEECCCC
SKPDRGIVTLRSETRNQRGEILQVLTSRLVVPRRPLNG
CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TETPPQRGAPLYLDDLQVGLRFGSGTHPIDAQQITAFADSFDPQPFHLDHEAAQDSLFG
CCCCCCCCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
GLAASGWHTAAITMRLLVEGGLPIAGGIIGAGAEVTWPRPTRPGDVLQVDSEVLEITPSR
CCCCCCCHHHHHHHHHHHHCCCCEECCEEECCCEEECCCCCCCCCEEEECCCEEEECCCC
SKPDRGIVTLRSETRNQRGEILQVLTSRLVVPRRPLNG
CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]