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The map label for this gene is 119896479

Identifier: 119896479

GI number: 119896479

Start: 203837

End: 204298

Strand: Reverse

Name: 119896479

Synonym: azo0187

Alternate gene names: NA

Gene position: 204298-203837 (Counterclockwise)

Preceding gene: 119896480

Following gene: 119896465

Centisome position: 4.67

GC content: 66.88

Gene sequence:

>462_bases
ATGTCGGAACATCGCGCCTCCCGTCGCGCCCAGCGCCCCCTACGCCCTGCCCTGTCCCTCGCCATGGCCGCAGCAATCGT
GCTGGCTGGCTGCGGCAAGGACAATGGCAAGGTCGACCCCGAAGTCACCGCGTCCCTCATTCAACCCGTGGCCAAGGTGG
AGCTGAAGGTTGTGACCGTGGCGCCGGGTAGCCGCACCGGTGAACAGATCTATAAGAGCATCTGTTCCAGCTGCCACGAC
GCAGGGATGCTCGGAGCCCCCAAGACGGGCGACAGTGGCGCGTGGGGCCCCCGTCTGGCACAGGGTTTCGACGGTTTGAC
GAAGTCGGCGATCGCCGGCAAGAACGCGATGCCGCCGCGCGGGGGTGGCTCCGACCTGACCGATACGGAGGTCAAGCGTG
CCGTGGCCTTCCTTGCCAACAAGGCCGGTGCCGGCTACACGGAACCCCCGGTTGCGCAGTAA

Upstream 100 bases:

>100_bases
ATATAGGTATTCGGGGCCGAAGTCCATGCCGCACTGCCACAATGGTTATTTCCGGAGATATAATCCGGGCTTTGCCCAGC
GCCAGTCAAAGGATCCAAGC

Downstream 100 bases:

>100_bases
GCCGGCAGCGATGCGGATGAAAGGCGGCCCACGGGCCGCCTTTTTTGTTGCCTGTGTCGTCCGAACCCGCGGCACGGGCG
GGACCTCTAGCTCCCTTCGT

Product: cytochrome c5

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSEHRASRRAQRPLRPALSLAMAAAIVLAGCGKDNGKVDPEVTASLIQPVAKVELKVVTVAPGSRTGEQIYKSICSSCHD
AGMLGAPKTGDSGAWGPRLAQGFDGLTKSAIAGKNAMPPRGGGSDLTDTEVKRAVAFLANKAGAGYTEPPVAQ

Sequences:

>Translated_153_residues
MSEHRASRRAQRPLRPALSLAMAAAIVLAGCGKDNGKVDPEVTASLIQPVAKVELKVVTVAPGSRTGEQIYKSICSSCHD
AGMLGAPKTGDSGAWGPRLAQGFDGLTKSAIAGKNAMPPRGGGSDLTDTEVKRAVAFLANKAGAGYTEPPVAQ
>Mature_152_residues
SEHRASRRAQRPLRPALSLAMAAAIVLAGCGKDNGKVDPEVTASLIQPVAKVELKVVTVAPGSRTGEQIYKSICSSCHDA
GMLGAPKTGDSGAWGPRLAQGFDGLTKSAIAGKNAMPPRGGGSDLTDTEVKRAVAFLANKAGAGYTEPPVAQ

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15653; Mature: 15522

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHRASRRAQRPLRPALSLAMAAAIVLAGCGKDNGKVDPEVTASLIQPVAKVELKVVTV
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEE
APGSRTGEQIYKSICSSCHDAGMLGAPKTGDSGAWGPRLAQGFDGLTKSAIAGKNAMPPR
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GGGSDLTDTEVKRAVAFLANKAGAGYTEPPVAQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SEHRASRRAQRPLRPALSLAMAAAIVLAGCGKDNGKVDPEVTASLIQPVAKVELKVVTV
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEEEE
APGSRTGEQIYKSICSSCHDAGMLGAPKTGDSGAWGPRLAQGFDGLTKSAIAGKNAMPPR
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GGGSDLTDTEVKRAVAFLANKAGAGYTEPPVAQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]