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The map label for this gene is 119896390

Identifier: 119896390

GI number: 119896390

Start: 117316

End: 118503

Strand: Reverse

Name: 119896390

Synonym: azo0098

Alternate gene names: NA

Gene position: 118503-117316 (Counterclockwise)

Preceding gene: 119896399

Following gene: 119896389

Centisome position: 2.71

GC content: 65.57

Gene sequence:

>1188_bases
GTGCAGAATTTCAAGCGATTTGACATGCATGCCCACGTGCTGTGCCGGGCAGGGTTCCGACGGCGCTGGGGTGGTTTGCG
ATCACCCTGTTTCGACCCTTGGCGGCAAAGCGGCGTTCCTGGACGGCGAGAGCCTTCCCGCACTTACCGGAAGCGAGCAA
TGATCCGAATTATATTCCCACTCCTCGTCAGCATTGCGACCCTGTTTGCCGGCGCCGCCGCGGCCCAGGGCGTCCAGCTT
GCGGACGACGCGCCCGACTCCTACACGGTGGTCAAGGGCGACACGCTGTGGGGCATTTCCGGCCGCTTCCTCAAGCAGCC
CTGGCGCTGGCCCGAGGTGTGGCGTTTCAACCGCGACCAGATCCGCAATCCGCACCTCATCTATCCCGGCCAGGTGATCC
TGCTCGACCGCAGCGGCCCGTGGCTGACGGTCGGCCGCCGGGTCGGCAGCCGCGACGAAAAACTGTTCCCGCAGGTCTAT
TCCGAAAGCGGTACGCAGCCGGTGCCCAGCATTCCGCTGCATGTCATCGATCCTTTCCTGACCCGCCCGCTGATCGTCGA
CGGCGCCCGCATCGCCAATTCGGCCACCATCGTCGCCACCGAAACCAGCCGCGTCTATACGGGCACCGGCGACACGGTGT
TCGCCAAGAACGTGCGTGAAGGGGTCGACAGCTGGCAGATCTACCGCCCGGCGCGCGCGCTGCACGACCCGGTCACCCAG
GAACTGCTCGGCTATGAAGCCGAATACCTCGGTAGCGCCCGCGTCACCGAGCGCGGCAACCCGACCACGCTGGAAATCCT
CAACGCCAACGAGGAGATCGGCGTCGGCGACCTGATGGTGCCCAGCGAGCCGCCGTCGGTGTTCTCCTATGCTCCCCATG
CGCCCGAGCAGGCCGTGGAAGGGCGCGTCGTGTCGATCTACCGCGGCGTGACCGAAACCGGTCGCCTGCACGTGGTTGCC
CTCGGCGCCGGTGCCCAGCAAGGCGTGGAACGTGGCCACGTGCTGGCGCTGTACCGCAATCGTGGCGTGGCTGAATACAA
GGACGACCAGGGGCGCGAATCCTTCCAGCTGCCGGAGAAGCGCTATGGCCTGGTGTTCGTGTTCCGCGTTTTCGACCGCA
TCTCGTACGGCCTGATCATGGAAACCGACGGTCAGGTCAGCATCGGCGACAGCATCCGCAAGCCCTGA

Upstream 100 bases:

>100_bases
TCGACCGTGTCGACGGGCGCGGCGCGCCGATGAAGCCGTGGATCGGGGTAGCGCAGGATGGGGAGAAGAGCCATAAATGC
TTGCCGGGATAAGCCTTTAA

Downstream 100 bases:

>100_bases
GCAGTGCCGCCGGGCAAGGATCTGGCCGGCTGGCTGCGGCTGGCACTGGCGCCCGGCCTCGGCCCGGAACGACAGCGCCG
GCTGCTCGCCGCCTTCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Lysm Domain Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQNFKRFDMHAHVLCRAGFRRRWGGLRSPCFDPWRQSGVPGRREPSRTYRKRAMIRIIFPLLVSIATLFAGAAAAQGVQL
ADDAPDSYTVVKGDTLWGISGRFLKQPWRWPEVWRFNRDQIRNPHLIYPGQVILLDRSGPWLTVGRRVGSRDEKLFPQVY
SESGTQPVPSIPLHVIDPFLTRPLIVDGARIANSATIVATETSRVYTGTGDTVFAKNVREGVDSWQIYRPARALHDPVTQ
ELLGYEAEYLGSARVTERGNPTTLEILNANEEIGVGDLMVPSEPPSVFSYAPHAPEQAVEGRVVSIYRGVTETGRLHVVA
LGAGAQQGVERGHVLALYRNRGVAEYKDDQGRESFQLPEKRYGLVFVFRVFDRISYGLIMETDGQVSIGDSIRKP

Sequences:

>Translated_395_residues
MQNFKRFDMHAHVLCRAGFRRRWGGLRSPCFDPWRQSGVPGRREPSRTYRKRAMIRIIFPLLVSIATLFAGAAAAQGVQL
ADDAPDSYTVVKGDTLWGISGRFLKQPWRWPEVWRFNRDQIRNPHLIYPGQVILLDRSGPWLTVGRRVGSRDEKLFPQVY
SESGTQPVPSIPLHVIDPFLTRPLIVDGARIANSATIVATETSRVYTGTGDTVFAKNVREGVDSWQIYRPARALHDPVTQ
ELLGYEAEYLGSARVTERGNPTTLEILNANEEIGVGDLMVPSEPPSVFSYAPHAPEQAVEGRVVSIYRGVTETGRLHVVA
LGAGAQQGVERGHVLALYRNRGVAEYKDDQGRESFQLPEKRYGLVFVFRVFDRISYGLIMETDGQVSIGDSIRKP
>Mature_395_residues
MQNFKRFDMHAHVLCRAGFRRRWGGLRSPCFDPWRQSGVPGRREPSRTYRKRAMIRIIFPLLVSIATLFAGAAAAQGVQL
ADDAPDSYTVVKGDTLWGISGRFLKQPWRWPEVWRFNRDQIRNPHLIYPGQVILLDRSGPWLTVGRRVGSRDEKLFPQVY
SESGTQPVPSIPLHVIDPFLTRPLIVDGARIANSATIVATETSRVYTGTGDTVFAKNVREGVDSWQIYRPARALHDPVTQ
ELLGYEAEYLGSARVTERGNPTTLEILNANEEIGVGDLMVPSEPPSVFSYAPHAPEQAVEGRVVSIYRGVTETGRLHVVA
LGAGAQQGVERGHVLALYRNRGVAEYKDDQGRESFQLPEKRYGLVFVFRVFDRISYGLIMETDGQVSIGDSIRKP

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44270; Mature: 44270

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNFKRFDMHAHVLCRAGFRRRWGGLRSPCFDPWRQSGVPGRREPSRTYRKRAMIRIIFP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LLVSIATLFAGAAAAQGVQLADDAPDSYTVVKGDTLWGISGRFLKQPWRWPEVWRFNRDQ
HHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCEEECCCCHHHCCCCCCHHHHCCCHHH
IRNPHLIYPGQVILLDRSGPWLTVGRRVGSRDEKLFPQVYSESGTQPVPSIPLHVIDPFL
CCCCEEECCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCHHH
TRPLIVDGARIANSATIVATETSRVYTGTGDTVFAKNVREGVDSWQIYRPARALHDPVTQ
HCCEEEECCEECCCEEEEEEECCEEEECCCCEEEHHHHHHCCHHHEEECCHHHHHHHHHH
ELLGYEAEYLGSARVTERGNPTTLEILNANEEIGVGDLMVPSEPPSVFSYAPHAPEQAVE
HHHCCCHHHCCCCEEECCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHC
GRVVSIYRGVTETGRLHVVALGAGAQQGVERGHVLALYRNRGVAEYKDDQGRESFQLPEK
CEEEEEECCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH
RYGLVFVFRVFDRISYGLIMETDGQVSIGDSIRKP
HCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MQNFKRFDMHAHVLCRAGFRRRWGGLRSPCFDPWRQSGVPGRREPSRTYRKRAMIRIIFP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LLVSIATLFAGAAAAQGVQLADDAPDSYTVVKGDTLWGISGRFLKQPWRWPEVWRFNRDQ
HHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECCEEECCCCHHHCCCCCCHHHHCCCHHH
IRNPHLIYPGQVILLDRSGPWLTVGRRVGSRDEKLFPQVYSESGTQPVPSIPLHVIDPFL
CCCCEEECCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCHHH
TRPLIVDGARIANSATIVATETSRVYTGTGDTVFAKNVREGVDSWQIYRPARALHDPVTQ
HCCEEEECCEECCCEEEEEEECCEEEECCCCEEEHHHHHHCCHHHEEECCHHHHHHHHHH
ELLGYEAEYLGSARVTERGNPTTLEILNANEEIGVGDLMVPSEPPSVFSYAPHAPEQAVE
HHHCCCHHHCCCCEEECCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHC
GRVVSIYRGVTETGRLHVVALGAGAQQGVERGHVLALYRNRGVAEYKDDQGRESFQLPEK
CEEEEEECCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH
RYGLVFVFRVFDRISYGLIMETDGQVSIGDSIRKP
HCCHHHHHHHHHHHCCCEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA