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The map label for this gene is ypdP [H]

Identifier: 119896399

GI number: 119896399

Start: 125118

End: 125834

Strand: Reverse

Name: ypdP [H]

Synonym: azo0107

Alternate gene names: 119896399

Gene position: 125834-125118 (Counterclockwise)

Preceding gene: 119896402

Following gene: 119896390

Centisome position: 2.88

GC content: 66.11

Gene sequence:

>717_bases
ATGAACCCCACGCCCGCCGCGCCGCGGCAGTACCGCTACTACGAGTTCGTGATGGCGGCCTTCGTTGCCGTCTATCTGTG
CTCCAACCTCATCGGCCCGGCCAAGGCGGCGCAGATCGAACTGCCGCTGATCGGCGCGGTGACCTTCGGCGCCGGCGTGC
TGTTCTTCCCGATCTCCTACATCTTTGGCGACGTGCTGACCGAGGTCTATGGCTACGCCCGCGCGCGGCGGGTGATCTGG
GCCGGTTTCGGCGCGATGATCTTCGCCTCGCTGATGGCCTGGGTGGTGGTGAAACTGCCGCCGGCCCCGGGCTGGCAGAA
CCAGGCGGCCTACGAGATCGCCTACGGCTCCACCTGGCGCATCGTCGCGGCGTCGCTCACGGCCTTCTTCTGCGGCGAGT
TCGTCAATTCCTTCGTGCTGGCGAAGATGAAGGTCTGGACCGAGGGCCGCCATCTGTGGGCGCGCACGATCGGCTCCACG
GTGGTGGGCGAAGGCGTCGATTCGCTGCTGTTCTACCCGCTCGCGTTCTGGAACTCCGGGCTGATCCCCAACGAGCTGCT
CCCCGCCGTCATGGTCGGCCAGTTTGTCTCCAAGGTGATGGTCGAAGTGGTGTTCACGCCGCTCACCTACCGCATCGTGG
CCTTCCTGAAGCGCGCCGAGCGCGAGGACTACTACGACCGCGACACCGACTTCACGCCGTTCTCGATCCGCGCCTGA

Upstream 100 bases:

>100_bases
AGGCTGCGGTGGCCGTCGAACCCGTCCCACACCCCCGCCTCGCCTTGAAGGGGAGGGAAAACCGGAACCCCAGCGCAGCA
CCCGCCTCCCCGGAGCCCGC

Downstream 100 bases:

>100_bases
ACCGGCGGGCGCTCAGCCCGCGCGGCGCGGCAACAGCGCTGCCGACAGCGCCAGCATGATCAGCACCGCCGCAGCGAGGT
CTTGCGGATGCGGTCGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNPTPAAPRQYRYYEFVMAAFVAVYLCSNLIGPAKAAQIELPLIGAVTFGAGVLFFPISYIFGDVLTEVYGYARARRVIW
AGFGAMIFASLMAWVVVKLPPAPGWQNQAAYEIAYGSTWRIVAASLTAFFCGEFVNSFVLAKMKVWTEGRHLWARTIGST
VVGEGVDSLLFYPLAFWNSGLIPNELLPAVMVGQFVSKVMVEVVFTPLTYRIVAFLKRAEREDYYDRDTDFTPFSIRA

Sequences:

>Translated_238_residues
MNPTPAAPRQYRYYEFVMAAFVAVYLCSNLIGPAKAAQIELPLIGAVTFGAGVLFFPISYIFGDVLTEVYGYARARRVIW
AGFGAMIFASLMAWVVVKLPPAPGWQNQAAYEIAYGSTWRIVAASLTAFFCGEFVNSFVLAKMKVWTEGRHLWARTIGST
VVGEGVDSLLFYPLAFWNSGLIPNELLPAVMVGQFVSKVMVEVVFTPLTYRIVAFLKRAEREDYYDRDTDFTPFSIRA
>Mature_238_residues
MNPTPAAPRQYRYYEFVMAAFVAVYLCSNLIGPAKAAQIELPLIGAVTFGAGVLFFPISYIFGDVLTEVYGYARARRVIW
AGFGAMIFASLMAWVVVKLPPAPGWQNQAAYEIAYGSTWRIVAASLTAFFCGEFVNSFVLAKMKVWTEGRHLWARTIGST
VVGEGVDSLLFYPLAFWNSGLIPNELLPAVMVGQFVSKVMVEVVFTPLTYRIVAFLKRAEREDYYDRDTDFTPFSIRA

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 26568; Mature: 26568

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTPAAPRQYRYYEFVMAAFVAVYLCSNLIGPAKAAQIELPLIGAVTFGAGVLFFPISY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
IFGDVLTEVYGYARARRVIWAGFGAMIFASLMAWVVVKLPPAPGWQNQAAYEIAYGSTWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHH
IVAASLTAFFCGEFVNSFVLAKMKVWTEGRHLWARTIGSTVVGEGVDSLLFYPLAFWNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LIPNELLPAVMVGQFVSKVMVEVVFTPLTYRIVAFLKRAEREDYYDRDTDFTPFSIRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPTPAAPRQYRYYEFVMAAFVAVYLCSNLIGPAKAAQIELPLIGAVTFGAGVLFFPISY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH
IFGDVLTEVYGYARARRVIWAGFGAMIFASLMAWVVVKLPPAPGWQNQAAYEIAYGSTWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHH
IVAASLTAFFCGEFVNSFVLAKMKVWTEGRHLWARTIGSTVVGEGVDSLLFYPLAFWNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
LIPNELLPAVMVGQFVSKVMVEVVFTPLTYRIVAFLKRAEREDYYDRDTDFTPFSIRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]