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The map label for this gene is ydiK [C]

Identifier: 119896356

GI number: 119896356

Start: 75546

End: 76649

Strand: Reverse

Name: ydiK [C]

Synonym: azo0064

Alternate gene names: 119896356

Gene position: 76649-75546 (Counterclockwise)

Preceding gene: 119896357

Following gene: 119896353

Centisome position: 1.75

GC content: 70.56

Gene sequence:

>1104_bases
ATGCCGTCCATCTTTCCCGCCCATCTCGTCGCCCGCTGGCTGCTGTTCCTGCTGCTGCTCGCAGGGGTGTATTTCCTCAG
CGGTTTCATCGTGCCGGTGCTGGCCGCGCTGATCATCGGCTTTGCCAGCTGGCCGCTGTACGAGCGCCTGCTGCGGCGCT
GCGGCGGGCGCAGCGCGGTGGCCGCGAGCCTCGCGCTGATGACCGTGATCCTGGTGCTGGTGGTGCCGCTGTCGCTCGCC
GGCTCGTACGCGATGCGCGAAGCCGACACGCTGATCGAATGGCTGCTGGCGGCCAACCGCAACGGCATGGCGCCACCGCG
CTGGGTGGAGGCGCTACCGCTGGTCGGCGGCCGGCTGGCGGCGCTGTGGCAGGAATACCTCGGCGCGCCGCAGGCCCTCG
GCGAGTGGGTGCAGATCCTCAGCGGGCAGCACCTCGGCAACATCTACCGCATCCTGCTCGCGGCCACCGGCGATCTGCTG
CACGCGGTGCTGACGCTGCTGTTCATGCTGATCACGCTGTTCTTCATCTACAAGGACGGCGACCGCATCGCGGCCCAGCT
CGACCGCGTCGGCGAGCAGGTGCTGCCGGCGCGCTGGCAGCGCTTCTCGCGCGTGGTGCCGGCCACCGTCAGCGCCACCG
TTACCGGCATGGGCCTGATCGCAATTGGCGAGGGCGTGGTGCTGGGGCTGGCCTACTGGATCGCCGGCGTACCGTCGCCG
GTGCTGCTGGGGGTGGCGACCGCCTTCATGGCGTTGATCCCGGGCGGCGCGCCGCTCGCATTCACGCTGGTGTCGCTCTA
CCTGGTGGGCTCGGGCGACCCGATGGCGGGCCTCGCGCTGTTCACCTGGGGCACCTGCGAACTCTTCATCGTGGACAAGA
CCCTGCGCCCGCGGCTGGTGGGCGGGCCGGTCAAGCTGCCCTTCCTGCCGACCTTCTTCGGCCTGGTCGGCGGGGTCAAG
ACGATGGGGCTGGTGGGGCTCTTCGTCGGCCCGGTGCTGATGGCGCTGCTGGTGGCGATCTGGCGCGAGTGGCTGCATCA
CACCGAGGAAGAGGCCGCCGCCGCCGTCGGCATCGAGGACGGACGCCCCGCCAGCGACGCCTGA

Upstream 100 bases:

>100_bases
CCGGCGTGCGCGGCGCTGCGGCCACGGCTGCCATCGTCGCGACGCCGCAACGCGGTATAGTCCGGCGGTCCGTCACGCCC
GGCCCGCCTCCGTCCCGTCC

Downstream 100 bases:

>100_bases
GCGCGCCGCCTTACAGCGAGAACTCGAACAACTGCGGCATCTGGCGGCGGTAGCGGCGCAGCTCGATGACGGTGGCCGGC
ACCAGGGTGCCGATCGCGTA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MPSIFPAHLVARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAVAASLALMTVILVLVVPLSLA
GSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLAALWQEYLGAPQALGEWVQILSGQHLGNIYRILLAATGDLL
HAVLTLLFMLITLFFIYKDGDRIAAQLDRVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSP
VLLGVATAFMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLVGGPVKLPFLPTFFGLVGGVK
TMGLVGLFVGPVLMALLVAIWREWLHHTEEEAAAAVGIEDGRPASDA

Sequences:

>Translated_367_residues
MPSIFPAHLVARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAVAASLALMTVILVLVVPLSLA
GSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLAALWQEYLGAPQALGEWVQILSGQHLGNIYRILLAATGDLL
HAVLTLLFMLITLFFIYKDGDRIAAQLDRVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSP
VLLGVATAFMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLVGGPVKLPFLPTFFGLVGGVK
TMGLVGLFVGPVLMALLVAIWREWLHHTEEEAAAAVGIEDGRPASDA
>Mature_366_residues
PSIFPAHLVARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAVAASLALMTVILVLVVPLSLAG
SYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLAALWQEYLGAPQALGEWVQILSGQHLGNIYRILLAATGDLLH
AVLTLLFMLITLFFIYKDGDRIAAQLDRVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSPV
LLGVATAFMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLVGGPVKLPFLPTFFGLVGGVKT
MGLVGLFVGPVLMALLVAIWREWLHHTEEEAAAAVGIEDGRPASDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=349, Percent_Identity=23.7822349570201, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39254; Mature: 39123

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSIFPAHLVARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH
AASLALMTVILVLVVPLSLAGSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
ALWQEYLGAPQALGEWVQILSGQHLGNIYRILLAATGDLLHAVLTLLFMLITLFFIYKDG
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRIAAQLDRVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
VLLGVATAFMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCEEEEEECCCCCCCCC
GGPVKLPFLPTFFGLVGGVKTMGLVGLFVGPVLMALLVAIWREWLHHTEEEAAAAVGIED
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
GRPASDA
CCCCCCC
>Mature Secondary Structure 
PSIFPAHLVARWLLFLLLLAGVYFLSGFIVPVLAALIIGFASWPLYERLLRRCGGRSAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH
AASLALMTVILVLVVPLSLAGSYAMREADTLIEWLLAANRNGMAPPRWVEALPLVGGRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH
ALWQEYLGAPQALGEWVQILSGQHLGNIYRILLAATGDLLHAVLTLLFMLITLFFIYKDG
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRIAAQLDRVGEQVLPARWQRFSRVVPATVSATVTGMGLIAIGEGVVLGLAYWIAGVPSP
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHH
VLLGVATAFMALIPGGAPLAFTLVSLYLVGSGDPMAGLALFTWGTCELFIVDKTLRPRLV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHEECCCEEEEEECCCCCCCCC
GGPVKLPFLPTFFGLVGGVKTMGLVGLFVGPVLMALLVAIWREWLHHTEEEAAAAVGIED
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
GRPASDA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]