| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yfaA [H]
Identifier: 119896353
GI number: 119896353
Start: 71744
End: 73438
Strand: Reverse
Name: yfaA [H]
Synonym: azo0061
Alternate gene names: 119896353
Gene position: 73438-71744 (Counterclockwise)
Preceding gene: 119896356
Following gene: 119896352
Centisome position: 1.68
GC content: 73.27
Gene sequence:
>1695_bases ATGACTTCCGCATCCCGCTCGCCGCGGCGCAAGCTGCTGTTCGGCGTAATCGTCCTCGCGCTGGTCGTCGGCGCCGTCGC GCTGTTCTGGCTCAAGCGCTTCGACGGCCACGTCAATGCGCTCGCGCTCGACCTCGCCCGTCCGGACGCTCTGATCCGCA CCCGCAGCCTCGCCCGTCTGCCGGCCGACCTGCTGCGGGTGCCGCTGGCGCGCGACGTGCTGACCGAGGACTTCGTCGAT TACTACGAGCGCCACGAGCAGCGCCTGGCGCTGTCCGGCACGCTGCGCCGCATCGCCTTCGAACACCGCCTGAGCCTGCC CGAGCGGGTGCTCGAATCGGTGTTCGACGAGCCTGCCGAGGTGGCGCTGTGGCGCGGCGCTGACGGCTCGCTCAAGCATT TCGTGGTGGCGATGACGCGCAACGGCCTTGCCCGTGCGCTGCAGATGGCGCTGCCGGTGTTGCCTGACACCCAGCTCGAA AGCGCCGGCACGCTGCGCGGCGGCAAGGCCCGCCTGCTGGTGCTGCAGTACGGCTACGGCCGCCAGCTGCTGCTCGCGGT GGAAGGCGATCGCGTGGTCGCGCTGTCCGACCCCGGCATGCTGCTGGTGGCCGACGACGGCGACGAGCACGCCGGCGAGG AGGGTGCCGAACCGGTGCAGGATGCGCGCGCGGCGGCGCTGGTGGCGCGCCTGCTCGAGTCCGATGCCGAGCGCGATTCG CCTTTCGACGCGCACTTCGCCCTCGCCCCGGCGGGCGCGGACGAAGGCCATCAGCTCGTGGTGTCGTCCGCTTTCTACAC CTTCGGCTATGGCGCCTTCGCGCCCGGCGTCGAGGCATTGTCGTTCGCCTTCGACGACAAGGGCGGCTGGCGCACCGCGG CGCTGATCGACGGCGCCCGTCTGCCCGCCGGTGGGCTCGATGGCGCGGGGCTGTGGCCCGCGCTGCCGCACGGCCCCAGC CTGTGCGCGCTGCTGCCGGCCGACTGGGGCGCGCTGGCGCCGCTCGCGGCCCGCATCGGCGCGGGTGCGGGGGGTGAAAG CGCCCGCGCCGGCGTCGGCGAACTCGCGCGCGAACTCTTCGGCGGCCCGGCTGCGGTGTGTTGGTATGGCGAATCGCGCC ACTACACGCCCTTGTTCGCCACCACGCTGCGGCGCGATGTCGATGAGGCCTGGGCCAAGGAGCTGGCGGCGCTGTTCGAT AGCGCGATCGGCAAGGGCGAACCGGCCCAGCGCGCGCCGGTTGAAGCCGGCCAGCGCGGCAGCGCGCGGCTGTGGCGGCG GACCGTGGAGACGCCTTATGGCGCGCGCCGCGGCGAGGACGAACCGGCGCTGGCGCCGACGCTCGCGGTGAGCGGCCGCA CGCTGGTGTTCTCGCCCGACGCCGCGCTGGTGGACAAGGCGCTCGATGTCGGCGCCAAGCTCTATCCCGCGGTGGGCGAC AGCCTGCCGGATGGCGCGCGCACGCTTGCGCTGCTGGAACCGGCGGCGCTGGCGAAGCTGGTGCGCAAGGAAGTGTTCGC GGCGCTGCCGCGTGACGAGGAAGCGGTGCTGCGCAACGCCGCCGACGCCAACCTGCTGCCGCGCCTGGAGGCGCTGGCCA AGTATCCGCCGCTGCGCCTGGTGCGCGCCGAAGGGGCGCTGGAAGGGCGTGGCTGGCACGCGCTGCAGTGGGAAAGCGCG GGGAACCGTCCGTGA
Upstream 100 bases:
>100_bases GCCCTGCCGCGTCGCGCAGCCCTGGGGCATAATCGCGCGGCCTATCCGCTTCGCATTACGCCGGCGGTCGATCCAACCCT GTCCAGACGGTGTCCGCTCC
Downstream 100 bases:
>100_bases GCGTCCGTCTCGCGGCACGCCGGCGCGCACTCGGCGCGGGGCTGCTGCTGCTCGGCGCCGCCACTCCGCTGCGCGCGCTG ATGCCGGTGGCACCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MTSASRSPRRKLLFGVIVLALVVGAVALFWLKRFDGHVNALALDLARPDALIRTRSLARLPADLLRVPLARDVLTEDFVD YYERHEQRLALSGTLRRIAFEHRLSLPERVLESVFDEPAEVALWRGADGSLKHFVVAMTRNGLARALQMALPVLPDTQLE SAGTLRGGKARLLVLQYGYGRQLLLAVEGDRVVALSDPGMLLVADDGDEHAGEEGAEPVQDARAAALVARLLESDAERDS PFDAHFALAPAGADEGHQLVVSSAFYTFGYGAFAPGVEALSFAFDDKGGWRTAALIDGARLPAGGLDGAGLWPALPHGPS LCALLPADWGALAPLAARIGAGAGGESARAGVGELARELFGGPAAVCWYGESRHYTPLFATTLRRDVDEAWAKELAALFD SAIGKGEPAQRAPVEAGQRGSARLWRRTVETPYGARRGEDEPALAPTLAVSGRTLVFSPDAALVDKALDVGAKLYPAVGD SLPDGARTLALLEPAALAKLVRKEVFAALPRDEEAVLRNAADANLLPRLEALAKYPPLRLVRAEGALEGRGWHALQWESA GNRP
Sequences:
>Translated_564_residues MTSASRSPRRKLLFGVIVLALVVGAVALFWLKRFDGHVNALALDLARPDALIRTRSLARLPADLLRVPLARDVLTEDFVD YYERHEQRLALSGTLRRIAFEHRLSLPERVLESVFDEPAEVALWRGADGSLKHFVVAMTRNGLARALQMALPVLPDTQLE SAGTLRGGKARLLVLQYGYGRQLLLAVEGDRVVALSDPGMLLVADDGDEHAGEEGAEPVQDARAAALVARLLESDAERDS PFDAHFALAPAGADEGHQLVVSSAFYTFGYGAFAPGVEALSFAFDDKGGWRTAALIDGARLPAGGLDGAGLWPALPHGPS LCALLPADWGALAPLAARIGAGAGGESARAGVGELARELFGGPAAVCWYGESRHYTPLFATTLRRDVDEAWAKELAALFD SAIGKGEPAQRAPVEAGQRGSARLWRRTVETPYGARRGEDEPALAPTLAVSGRTLVFSPDAALVDKALDVGAKLYPAVGD SLPDGARTLALLEPAALAKLVRKEVFAALPRDEEAVLRNAADANLLPRLEALAKYPPLRLVRAEGALEGRGWHALQWESA GNRP >Mature_563_residues TSASRSPRRKLLFGVIVLALVVGAVALFWLKRFDGHVNALALDLARPDALIRTRSLARLPADLLRVPLARDVLTEDFVDY YERHEQRLALSGTLRRIAFEHRLSLPERVLESVFDEPAEVALWRGADGSLKHFVVAMTRNGLARALQMALPVLPDTQLES AGTLRGGKARLLVLQYGYGRQLLLAVEGDRVVALSDPGMLLVADDGDEHAGEEGAEPVQDARAAALVARLLESDAERDSP FDAHFALAPAGADEGHQLVVSSAFYTFGYGAFAPGVEALSFAFDDKGGWRTAALIDGARLPAGGLDGAGLWPALPHGPSL CALLPADWGALAPLAARIGAGAGGESARAGVGELARELFGGPAAVCWYGESRHYTPLFATTLRRDVDEAWAKELAALFDS AIGKGEPAQRAPVEAGQRGSARLWRRTVETPYGARRGEDEPALAPTLAVSGRTLVFSPDAALVDKALDVGAKLYPAVGDS LPDGARTLALLEPAALAKLVRKEVFAALPRDEEAVLRNAADANLLPRLEALAKYPPLRLVRAEGALEGRGWHALQWESAG NRP
Specific function: Unknown
COG id: COG4685
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082069, Length=538, Percent_Identity=31.2267657992565, Blast_Score=243, Evalue=3e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018671 [H]
Pfam domain/function: PF09909 DUF2138 [H]
EC number: NA
Molecular weight: Translated: 60155; Mature: 60024
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSASRSPRRKLLFGVIVLALVVGAVALFWLKRFDGHVNALALDLARPDALIRTRSLARL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC PADLLRVPLARDVLTEDFVDYYERHEQRLALSGTLRRIAFEHRLSLPERVLESVFDEPAE CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC VALWRGADGSLKHFVVAMTRNGLARALQMALPVLPDTQLESAGTLRGGKARLLVLQYGYG EEEEECCCCCHHHEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC RQLLLAVEGDRVVALSDPGMLLVADDGDEHAGEEGAEPVQDARAAALVARLLESDAERDS CEEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PFDAHFALAPAGADEGHQLVVSSAFYTFGYGAFAPGVEALSFAFDDKGGWRTAALIDGAR CCCCEEEEECCCCCCCCEEEEEHHHHHHCCHHHCCCHHHHHEEECCCCCEEEEEEECCCC LPAGGLDGAGLWPALPHGPSLCALLPADWGALAPLAARIGAGAGGESARAGVGELARELF CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHC GGPAAVCWYGESRHYTPLFATTLRRDVDEAWAKELAALFDSAIGKGEPAQRAPVEAGQRG CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SARLWRRTVETPYGARRGEDEPALAPTLAVSGRTLVFSPDAALVDKALDVGAKLYPAVGD CHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCHHHHHCCC SLPDGARTLALLEPAALAKLVRKEVFAALPRDEEAVLRNAADANLLPRLEALAKYPPLRL CCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEE VRAEGALEGRGWHALQWESAGNRP EEECCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure TSASRSPRRKLLFGVIVLALVVGAVALFWLKRFDGHVNALALDLARPDALIRTRSLARL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC PADLLRVPLARDVLTEDFVDYYERHEQRLALSGTLRRIAFEHRLSLPERVLESVFDEPAE CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC VALWRGADGSLKHFVVAMTRNGLARALQMALPVLPDTQLESAGTLRGGKARLLVLQYGYG EEEEECCCCCHHHEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC RQLLLAVEGDRVVALSDPGMLLVADDGDEHAGEEGAEPVQDARAAALVARLLESDAERDS CEEEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC PFDAHFALAPAGADEGHQLVVSSAFYTFGYGAFAPGVEALSFAFDDKGGWRTAALIDGAR CCCCEEEEECCCCCCCCEEEEEHHHHHHCCHHHCCCHHHHHEEECCCCCEEEEEEECCCC LPAGGLDGAGLWPALPHGPSLCALLPADWGALAPLAARIGAGAGGESARAGVGELARELF CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHC GGPAAVCWYGESRHYTPLFATTLRRDVDEAWAKELAALFDSAIGKGEPAQRAPVEAGQRG CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SARLWRRTVETPYGARRGEDEPALAPTLAVSGRTLVFSPDAALVDKALDVGAKLYPAVGD CHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCHHHHHCCC SLPDGARTLALLEPAALAKLVRKEVFAALPRDEEAVLRNAADANLLPRLEALAKYPPLRL CCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEE VRAEGALEGRGWHALQWESAGNRP EEECCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 2834621 [H]