| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yfaT [C]
Identifier: 119896352
GI number: 119896352
Start: 71064
End: 71747
Strand: Reverse
Name: yfaT [C]
Synonym: azo0060
Alternate gene names: 119896352
Gene position: 71747-71064 (Counterclockwise)
Preceding gene: 119896353
Following gene: 119896351
Centisome position: 1.64
GC content: 74.12
Gene sequence:
>684_bases GTGAGCGTCCGTCTCGCGGCACGCCGGCGCGCACTCGGCGCGGGGCTGCTGCTGCTCGGCGCCGCCACTCCGCTGCGCGC GCTGATGCCGGTGGCACCGGGGCGCGCTGCCGAGCCGGTGGCGCAGCTGGATGCCGAACAGAGCCGCGCGCTGCGTGCCT GGGTGGTGCGGATCGCCGAGGCGCAGATCCGGCGCGGCCCGACCCCGCGCTGGACCCATCGCGACTGCGCCGGGCTGGTG CGCTTCGCGGTGGCCGAGGCGCTGGCCGAGCACGACGCACGCTGGCGCCAGGCGATGGGCATTTCCCGTCGCCTGCCGCC TGATACCGTGCCCGCGGCCTTGCGCGCCGAACTGCGCCACCGCTGGAAGCGGCCCGACGGCAGCACTGGCGCCTACGTGA ATGCGATCGGCCTCGTGCAGGAAAACAGCCGCCCGGTCGGGCGCGACCTGCGCCTTGCCCGCCCGGCCGATCTGCTGTTC TTCGACCAGGGCGACGCCCAGCACCTGATGCTGTGGACCGGCTACCGCATCGTCTATCACAACGGCGCCGAGCCCCGCCC CGGCGACGACGGCCTGCGCGCGGTAACGCCGCGCGAACTGCTGCAATGGACCGACACGCGCTGGCGGCCCGACGCTACCA ACCCGAATTTCGCCGGCGTGCACACGCTGGCCTTCCTTGCCTGA
Upstream 100 bases:
>100_bases CGCTGGCCAAGTATCCGCCGCTGCGCCTGGTGCGCGCCGAAGGGGCGCTGGAAGGGCGTGGCTGGCACGCGCTGCAGTGG GAAAGCGCGGGGAACCGTCC
Downstream 100 bases:
>100_bases TCCACGCGCCATGACGACCCTACTCCGCCCGTCCCTCCCGCGTCTGCTTTCCGCCGCGCTGCTCGCGCTTGCCTGCACGG TGGCGCCGCCGCCGGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSVRLAARRRALGAGLLLLGAATPLRALMPVAPGRAAEPVAQLDAEQSRALRAWVVRIAEAQIRRGPTPRWTHRDCAGLV RFAVAEALAEHDARWRQAMGISRRLPPDTVPAALRAELRHRWKRPDGSTGAYVNAIGLVQENSRPVGRDLRLARPADLLF FDQGDAQHLMLWTGYRIVYHNGAEPRPGDDGLRAVTPRELLQWTDTRWRPDATNPNFAGVHTLAFLA
Sequences:
>Translated_227_residues MSVRLAARRRALGAGLLLLGAATPLRALMPVAPGRAAEPVAQLDAEQSRALRAWVVRIAEAQIRRGPTPRWTHRDCAGLV RFAVAEALAEHDARWRQAMGISRRLPPDTVPAALRAELRHRWKRPDGSTGAYVNAIGLVQENSRPVGRDLRLARPADLLF FDQGDAQHLMLWTGYRIVYHNGAEPRPGDDGLRAVTPRELLQWTDTRWRPDATNPNFAGVHTLAFLA >Mature_226_residues SVRLAARRRALGAGLLLLGAATPLRALMPVAPGRAAEPVAQLDAEQSRALRAWVVRIAEAQIRRGPTPRWTHRDCAGLVR FAVAEALAEHDARWRQAMGISRRLPPDTVPAALRAELRHRWKRPDGSTGAYVNAIGLVQENSRPVGRDLRLARPADLLFF DQGDAQHLMLWTGYRIVYHNGAEPRPGDDGLRAVTPRELLQWTDTRWRPDATNPNFAGVHTLAFLA
Specific function: Unknown
COG id: COG3234
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfaT and T.maritima TM0986 [H]
Homologues:
Organism=Escherichia coli, GI87082068, Length=186, Percent_Identity=49.4623655913978, Blast_Score=208, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009558 [H]
Pfam domain/function: PF06672 DUF1175 [H]
EC number: NA
Molecular weight: Translated: 25185; Mature: 25054
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRLAARRRALGAGLLLLGAATPLRALMPVAPGRAAEPVAQLDAEQSRALRAWVVRIAE CCCCHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHH AQIRRGPTPRWTHRDCAGLVRFAVAEALAEHDARWRQAMGISRRLPPDTVPAALRAELRH HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RWKRPDGSTGAYVNAIGLVQENSRPVGRDLRLARPADLLFFDQGDAQHLMLWTGYRIVYH HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECEEEEEE NGAEPRPGDDGLRAVTPRELLQWTDTRWRPDATNPNFAGVHTLAFLA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure SVRLAARRRALGAGLLLLGAATPLRALMPVAPGRAAEPVAQLDAEQSRALRAWVVRIAE CCCHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHH AQIRRGPTPRWTHRDCAGLVRFAVAEALAEHDARWRQAMGISRRLPPDTVPAALRAELRH HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RWKRPDGSTGAYVNAIGLVQENSRPVGRDLRLARPADLLFFDQGDAQHLMLWTGYRIVYH HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECEEEEEE NGAEPRPGDDGLRAVTPRELLQWTDTRWRPDATNPNFAGVHTLAFLA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]