Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is astA [H]

Identifier: 229220633

GI number: 229220633

Start: 1991829

End: 1992875

Strand: Reverse

Name: astA [H]

Synonym: Sama_1627

Alternate gene names: 229220633

Gene position: 1992875-1991829 (Counterclockwise)

Preceding gene: 119774765

Following gene: 119774763

Centisome position: 46.28

GC content: 54.82

Gene sequence:

>1047_bases
ATGTTACTTATCCGTCCTATACAGGGTTCGGATTTCCAGGCGCTGATGACCATGGCGCGGGAATCCGGAGCAGGTTTTAC
CTCCCTGCCCCTTTGCGAGCGAAAACTGACCCACAAAATAGCGCACTCGGAAGAGAGCTTTGCCGCCGATATCGATGCGC
CTGGCGATCAGGGTTATCTGTTTGTGCTGGAAGACACAGACACGGGCGAAATCCTTGGCGCTTCTGGTATCGAGGCCTCG
GTTGGCCTGGGCAGCCCGCTGTACCACTTCCACAAGAGTACCGTGGTGCATCAGTGTAAGGAGCTGGATATTTTCAATCC
GGTGGAAGTCCTTACCCTGGGCAATGATTACACAGGCGTGACTGAAATCTGCACCCTGTTTTTGCGTGAGCCTTACCGGG
TGGGCCTCAATGGCCGCTTCCTGTCCAAGGTACGCTTTATGTTTATGGCCGAGCACCCCAAACGTTTTTCCCAGCTGGTA
ATTGCCGAGATGCGCGGCGCCGCCGATGAAAACGGTCAGCCCCCATTTTGGGGCTGGCTTAGGGAAACCTTCTTCAATAT
GGAGTTTTCCAAGGCCGATTACCTGATTGGCGTGGGCAACAAGGGGTTTATTGCCGACCTGATGCCCCGCTATCCCATCT
ACGTTGATTTGTTGCCCGAAGCGGCCCGAAACACCATAGGCCAGGTGCATGAAAACACAGTTCCTGCCCTTAAGCTTTTG
GAAAACGAAGGTTTTATGCATCGTGGCTATGTGGATCTGTTCGATGCTGGCCCCACGGTGGAAGCCCAGCTTAAGCAAAT
CAAGTCGGTGCGCCAGAGCCACAGGGTCAAGGTGGTGATAAGCCAAAACCCGGCCGAGCACAAAGGTGAGTTTCATCTGG
CAGTGTGCAACTGCGACAGCAAGGCATTTCGCGCCACCGTCAGCGACGAGTGTCGTCTCGAACCCGAAACCCACAGCATA
CTGATGAGCCCGGCCATGGCCGATGTGCTCAATGTCGCCGAGGGCGATTTGGTGCGTTACTTAAATCTGGACAAGGGGGC
CAAATGA

Upstream 100 bases:

>100_bases
TTGCCAGGCTTAACGCCGGTTAAACCGCCTTAGGCATTTGTGCGAACAGGCGATGGGGCTTTGCCCTTTCGCCTTCCACA
CAGACCAAGAGAACCGAATT

Downstream 100 bases:

>100_bases
GCTCAGTGATCAATAATCCGTCAAGCTGTCAGTTTATTGGTGGACAGTGGCAACCCGGCCACGGTAAAGGCTTTGAGTCG
ATTAATCCGGCCAATGGAGA

Product: arginine N-succinyltransferase

Products: NA

Alternate protein names: AST; AOST [H]

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MLLIRPIQGSDFQALMTMARESGAGFTSLPLCERKLTHKIAHSEESFAADIDAPGDQGYLFVLEDTDTGEILGASGIEAS
VGLGSPLYHFHKSTVVHQCKELDIFNPVEVLTLGNDYTGVTEICTLFLREPYRVGLNGRFLSKVRFMFMAEHPKRFSQLV
IAEMRGAADENGQPPFWGWLRETFFNMEFSKADYLIGVGNKGFIADLMPRYPIYVDLLPEAARNTIGQVHENTVPALKLL
ENEGFMHRGYVDLFDAGPTVEAQLKQIKSVRQSHRVKVVISQNPAEHKGEFHLAVCNCDSKAFRATVSDECRLEPETHSI
LMSPAMADVLNVAEGDLVRYLNLDKGAK

Sequences:

>Translated_348_residues
MLLIRPIQGSDFQALMTMARESGAGFTSLPLCERKLTHKIAHSEESFAADIDAPGDQGYLFVLEDTDTGEILGASGIEAS
VGLGSPLYHFHKSTVVHQCKELDIFNPVEVLTLGNDYTGVTEICTLFLREPYRVGLNGRFLSKVRFMFMAEHPKRFSQLV
IAEMRGAADENGQPPFWGWLRETFFNMEFSKADYLIGVGNKGFIADLMPRYPIYVDLLPEAARNTIGQVHENTVPALKLL
ENEGFMHRGYVDLFDAGPTVEAQLKQIKSVRQSHRVKVVISQNPAEHKGEFHLAVCNCDSKAFRATVSDECRLEPETHSI
LMSPAMADVLNVAEGDLVRYLNLDKGAK
>Mature_348_residues
MLLIRPIQGSDFQALMTMARESGAGFTSLPLCERKLTHKIAHSEESFAADIDAPGDQGYLFVLEDTDTGEILGASGIEAS
VGLGSPLYHFHKSTVVHQCKELDIFNPVEVLTLGNDYTGVTEICTLFLREPYRVGLNGRFLSKVRFMFMAEHPKRFSQLV
IAEMRGAADENGQPPFWGWLRETFFNMEFSKADYLIGVGNKGFIADLMPRYPIYVDLLPEAARNTIGQVHENTVPALKLL
ENEGFMHRGYVDLFDAGPTVEAQLKQIKSVRQSHRVKVVISQNPAEHKGEFHLAVCNCDSKAFRATVSDECRLEPETHSI
LMSPAMADVLNVAEGDLVRYLNLDKGAK

Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]

COG id: COG3138

COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginine N-succinyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1788043, Length=344, Percent_Identity=43.6046511627907, Blast_Score=296, Evalue=1e-81,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR007041
- InterPro:   IPR017650 [H]

Pfam domain/function: PF04958 AstA [H]

EC number: =2.3.1.109 [H]

Molecular weight: Translated: 38755; Mature: 38755

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLIRPIQGSDFQALMTMARESGAGFTSLPLCERKLTHKIAHSEESFAADIDAPGDQGYL
CEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHEECCCCCCCCCEE
FVLEDTDTGEILGASGIEASVGLGSPLYHFHKSTVVHQCKELDIFNPVEVLTLGNDYTGV
EEEECCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
TEICTLFLREPYRVGLNGRFLSKVRFMFMAEHPKRFSQLVIAEMRGAADENGQPPFWGWL
HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RETFFNMEFSKADYLIGVGNKGFIADLMPRYPIYVDLLPEAARNTIGQVHENTVPALKLL
HHHHHCCEECCCCEEEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHH
ENEGFMHRGYVDLFDAGPTVEAQLKQIKSVRQSHRVKVVISQNPAEHKGEFHLAVCNCDS
HCCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCC
KAFRATVSDECRLEPETHSILMSPAMADVLNVAEGDLVRYLNLDKGAK
HHHEEECCCCCEECCCHHHEEECHHHHHHHHHCCCCEEEEEECCCCCC
>Mature Secondary Structure
MLLIRPIQGSDFQALMTMARESGAGFTSLPLCERKLTHKIAHSEESFAADIDAPGDQGYL
CEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHEECCCCCCCCCEE
FVLEDTDTGEILGASGIEASVGLGSPLYHFHKSTVVHQCKELDIFNPVEVLTLGNDYTGV
EEEECCCCCCEEECCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
TEICTLFLREPYRVGLNGRFLSKVRFMFMAEHPKRFSQLVIAEMRGAADENGQPPFWGWL
HHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
RETFFNMEFSKADYLIGVGNKGFIADLMPRYPIYVDLLPEAARNTIGQVHENTVPALKLL
HHHHHCCEECCCCEEEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHHH
ENEGFMHRGYVDLFDAGPTVEAQLKQIKSVRQSHRVKVVISQNPAEHKGEFHLAVCNCDS
HCCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCC
KAFRATVSDECRLEPETHSILMSPAMADVLNVAEGDLVRYLNLDKGAK
HHHEEECCCCCEECCCHHHEEECHHHHHHHHHCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA