Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776766

Identifier: 119776766

GI number: 119776766

Start: 4284116

End: 4284466

Strand: Direct

Name: 119776766

Synonym: Sama_3634

Alternate gene names: NA

Gene position: 4284116-4284466 (Clockwise)

Preceding gene: 119776763

Following gene: 119776767

Centisome position: 99.49

GC content: 43.87

Gene sequence:

>351_bases
ATGAGAGGCTGGATAATCTTGGCATTGATCGCCGGCGGTTTGTATTACCTCTATACCGAAACCGACAAACTGGACGAACC
TATCGCTGAAACTCAGATGGTGCTTAAGAAGATTGAGCGAAAGCTCGATTCTTTAACCGGCACACAAATCATTCGTGTTG
ACGGTAGGTTGCAGAAACTCAAGGCAGAAATAGGCCAGCGACTCACAGCAGCGGAGCTTTCAGAATTTGATGCTGTTCTA
ACCGATAAAAACAGCGTGATGGATTTTAAAGAAAGCTACTGTGAAAAAAGTGGCGTGAGCCATCCGGTTTTTGACAAAGA
AAACCTGCTGTTTATTTGCGACAATCTTTAA

Upstream 100 bases:

>100_bases
TCTGCGTTCATCTGACAACCTTTTACCGCTTTAATGTTGCTCGAAAAGTGGCTTATTATAGCCTTATTACTAAAGTACAT
TCACTCGATTGGACCAAAAG

Downstream 100 bases:

>100_bases
TGCTTTTGTCGGCCACCCCATGGCTTTTACCTTAAAGCATTGACCCTAAATCAACTTGAGCCTAGCCTGTGGCAACTAAT
CTGAACATAGGCAGGCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRGWIILALIAGGLYYLYTETDKLDEPIAETQMVLKKIERKLDSLTGTQIIRVDGRLQKLKAEIGQRLTAAELSEFDAVL
TDKNSVMDFKESYCEKSGVSHPVFDKENLLFICDNL

Sequences:

>Translated_116_residues
MRGWIILALIAGGLYYLYTETDKLDEPIAETQMVLKKIERKLDSLTGTQIIRVDGRLQKLKAEIGQRLTAAELSEFDAVL
TDKNSVMDFKESYCEKSGVSHPVFDKENLLFICDNL
>Mature_116_residues
MRGWIILALIAGGLYYLYTETDKLDEPIAETQMVLKKIERKLDSLTGTQIIRVDGRLQKLKAEIGQRLTAAELSEFDAVL
TDKNSVMDFKESYCEKSGVSHPVFDKENLLFICDNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13172; Mature: 13172

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGWIILALIAGGLYYLYTETDKLDEPIAETQMVLKKIERKLDSLTGTQIIRVDGRLQKL
CCCCEEHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
KAEIGQRLTAAELSEFDAVLTDKNSVMDFKESYCEKSGVSHPVFDKENLLFICDNL
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MRGWIILALIAGGLYYLYTETDKLDEPIAETQMVLKKIERKLDSLTGTQIIRVDGRLQKL
CCCCEEHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
KAEIGQRLTAAELSEFDAVLTDKNSVMDFKESYCEKSGVSHPVFDKENLLFICDNL
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA