| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is fixG [H]
Identifier: 119776765
GI number: 119776765
Start: 4282602
End: 4284026
Strand: Reverse
Name: fixG [H]
Synonym: Sama_3633
Alternate gene names: 119776765
Gene position: 4284026-4282602 (Counterclockwise)
Preceding gene: 119776769
Following gene: 119776764
Centisome position: 99.49
GC content: 51.02
Gene sequence:
>1425_bases ATGAACGCAGATTCGAATAAAAAGGACTACTCGAAAGCCGAGCGGATTAAAATCCACCAACCAGATGCCAGCAAGGCAGA CAGATTTAACCCCCGTAACCGAATTTATGTCCGTGCCGTTGATGGTTTATGGAGTAAAGTACGTCGCCGCATGGGCTGGG TGGCAATGTTGTTCTTCCTGTTATTGCCATGGCTCCCATGGGGTGATAGGCAAGCAGTGTGGTTTAACCTGGCAGAACAA AAGTTTCATGTTTTTGGCCTGACAATTTGGCCCCAGGATCTGACCCTGCTGGCAGCACTCTTCATGATTGCGGCCTTTGC ACTGTTTTTTGTGACCACGTACCTTGGGCGCGTTTGGTGTGGCTATACCTGCCCACAAACCGTCTGGACCTTTATCTTTA TCTGGTTTGAAGAAAAACTCGAAGGTCCCCGCAATAAGCGCATCAAGATGGACCAAATGCCATGGGACTTTGATAAGGTC TGGCGCAAAACGGCCAAGCACGGTGCCTGGTTGCTGATCTCTTTCCTTACAGCAACAACTTTTGTTTCCTATTTTGTGCC CACCCGTGAGCTTTACCTGGATGTGCTCACCCTGAATGCCAGCGGTGGGATTTACTTCTGGGTGGTGTTCTTTACCTTCG CTACGTATGGCAATGCCGGTTGGATGCGGGAAATCATGTGTATCCACATGTGCCCCTATGCCCGCTTCCAGGCAGCCATG TTCGATAAGAACACTTATATAGTGGGTTATGATGCCGCACGCGGTGAAACCCGTGGCCCACGGTCACGTAAAGCAGACCC CAAAGAAATGGGACTGGGTGACTGTATCGACTGCGACCTCTGTGTGCAGGTATGCCCAACCGGTATCGATATCCGCAATG GTCTGCAATATGAGTGCATCAACTGTGGTGCCTGTATCGATGCCTGTGACCAGACCATGGACCGCATGGGTTATGCCAAG GGCCTTATCAGCTACACCACCGAAAACATGCTGGAAGGTAAGAAGGAGAAAGTACTCAGGCCCAAGCTGGTGGGTTATGG TGTGGTGCTGACGACGATGATTTTGGTATTCGTTGGTCTCGCGGCGACTATCTCACCGCTGCGCATCGACGTAATCCGTG ACCGTAACGCCCTTTACCGTGAAGACAGCCGTGGCCTGATTGAGAACACCTTTACTTTGAAGATCCTCAACAAGACTGAA GCCGACCACGTATATAGCCTCTCGGTAGAAGATCTGCCCAACTACCGCTGGATTGGTGATAAGACTGTTACGGTCAAAGC GGGAGAGGTGTTAACGCTTCCCGTCAGCGTGGCAGTAGATCCTGTTGAACTGAAACGCCCTATCACCAAAATCAATATTC GTGTGGTGGCGGAAGACATGCCACAAGTCGAAGCCGTGCAGGAAACACGTTTCTTCGGGCCGTAA
Upstream 100 bases:
>100_bases CAGCCTCTCATCTTTTGGTCCAATCGAGTGAATGTACTTTAGTAATAAGGCTATAATAAGCCACTTTTCGAGCAACATTA AAGCGGTAAAAGGTTGTCAG
Downstream 100 bases:
>100_bases AACAGCTTGGCTCTCGCCAGCAGTAAGCAATAATGCAGTAAAAAAGGGGCGAAATGCCCCTTTTTTATTCGTTTAGCTCG CAAAATGAACGAACGCGATA
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNADSNKKDYSKAERIKIHQPDASKADRFNPRNRIYVRAVDGLWSKVRRRMGWVAMLFFLLLPWLPWGDRQAVWFNLAEQ KFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWCGYTCPQTVWTFIFIWFEEKLEGPRNKRIKMDQMPWDFDKV WRKTAKHGAWLLISFLTATTFVSYFVPTRELYLDVLTLNASGGIYFWVVFFTFATYGNAGWMREIMCIHMCPYARFQAAM FDKNTYIVGYDAARGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECINCGACIDACDQTMDRMGYAK GLISYTTENMLEGKKEKVLRPKLVGYGVVLTTMILVFVGLAATISPLRIDVIRDRNALYREDSRGLIENTFTLKILNKTE ADHVYSLSVEDLPNYRWIGDKTVTVKAGEVLTLPVSVAVDPVELKRPITKINIRVVAEDMPQVEAVQETRFFGP
Sequences:
>Translated_474_residues MNADSNKKDYSKAERIKIHQPDASKADRFNPRNRIYVRAVDGLWSKVRRRMGWVAMLFFLLLPWLPWGDRQAVWFNLAEQ KFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWCGYTCPQTVWTFIFIWFEEKLEGPRNKRIKMDQMPWDFDKV WRKTAKHGAWLLISFLTATTFVSYFVPTRELYLDVLTLNASGGIYFWVVFFTFATYGNAGWMREIMCIHMCPYARFQAAM FDKNTYIVGYDAARGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECINCGACIDACDQTMDRMGYAK GLISYTTENMLEGKKEKVLRPKLVGYGVVLTTMILVFVGLAATISPLRIDVIRDRNALYREDSRGLIENTFTLKILNKTE ADHVYSLSVEDLPNYRWIGDKTVTVKAGEVLTLPVSVAVDPVELKRPITKINIRVVAEDMPQVEAVQETRFFGP >Mature_474_residues MNADSNKKDYSKAERIKIHQPDASKADRFNPRNRIYVRAVDGLWSKVRRRMGWVAMLFFLLLPWLPWGDRQAVWFNLAEQ KFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWCGYTCPQTVWTFIFIWFEEKLEGPRNKRIKMDQMPWDFDKV WRKTAKHGAWLLISFLTATTFVSYFVPTRELYLDVLTLNASGGIYFWVVFFTFATYGNAGWMREIMCIHMCPYARFQAAM FDKNTYIVGYDAARGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECINCGACIDACDQTMDRMGYAK GLISYTTENMLEGKKEKVLRPKLVGYGVVLTTMILVFVGLAATISPLRIDVIRDRNALYREDSRGLIENTFTLKILNKTE ADHVYSLSVEDLPNYRWIGDKTVTVKAGEVLTLPVSVAVDPVELKRPITKINIRVVAEDMPQVEAVQETRFFGP
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54425; Mature: 54425
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADSNKKDYSKAERIKIHQPDASKADRFNPRNRIYVRAVDGLWSKVRRRMGWVAMLFFL CCCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH LLPWLPWGDRQAVWFNLAEQKFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWC HHHCCCCCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYTCPQTVWTFIFIWFEEKLEGPRNKRIKMDQMPWDFDKVWRKTAKHGAWLLISFLTATT CCCCHHHHHHHHHEEEHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHH FVSYFVPTRELYLDVLTLNASGGIYFWVVFFTFATYGNAGWMREIMCIHMCPYARFQAAM HHHHHCCCHHHEEEEEEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH FDKNTYIVGYDAARGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECI CCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEE NCGACIDACDQTMDRMGYAKGLISYTTENMLEGKKEKVLRPKLVGYGVVLTTMILVFVGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHH AATISPLRIDVIRDRNALYREDSRGLIENTFTLKILNKTEADHVYSLSVEDLPNYRWIGD HHHCCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHCCCEEEECC KTVTVKAGEVLTLPVSVAVDPVELKRPITKINIRVVAEDMPQVEAVQETRFFGP EEEEEECCCEEEEEEEEEECHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCCC >Mature Secondary Structure MNADSNKKDYSKAERIKIHQPDASKADRFNPRNRIYVRAVDGLWSKVRRRMGWVAMLFFL CCCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH LLPWLPWGDRQAVWFNLAEQKFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWC HHHCCCCCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYTCPQTVWTFIFIWFEEKLEGPRNKRIKMDQMPWDFDKVWRKTAKHGAWLLISFLTATT CCCCHHHHHHHHHEEEHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHH FVSYFVPTRELYLDVLTLNASGGIYFWVVFFTFATYGNAGWMREIMCIHMCPYARFQAAM HHHHHCCCHHHEEEEEEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH FDKNTYIVGYDAARGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECI CCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEE NCGACIDACDQTMDRMGYAKGLISYTTENMLEGKKEKVLRPKLVGYGVVLTTMILVFVGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHH AATISPLRIDVIRDRNALYREDSRGLIENTFTLKILNKTEADHVYSLSVEDLPNYRWIGD HHHCCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHCCCEEEECC KTVTVKAGEVLTLPVSVAVDPVELKRPITKINIRVVAEDMPQVEAVQETRFFGP EEEEEECCCEEEEEEEEEECHHHHHCCCEEEEEEEEECCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]