Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776752

Identifier: 119776752

GI number: 119776752

Start: 4260195

End: 4261103

Strand: Direct

Name: 119776752

Synonym: Sama_3620

Alternate gene names: NA

Gene position: 4260195-4261103 (Clockwise)

Preceding gene: 119776751

Following gene: 119776755

Centisome position: 98.93

GC content: 56.44

Gene sequence:

>909_bases
ATGACCGACGAAGTGCAGCTGGTGTATATGAGCGCCAAACAGGTGGCCGAATATTTGGACCTCAATGAGAAAAAGGTCTA
CGCCATGGCCAATGACCGTATCTTGCCCGCCACCAAGGTAACAGGCAAGTGGTTGTTTCCAAAAGTGCTTATTGACAGAT
GGGTAATGGACTCCTGCCATAGCGGCATGCTCACCGATCGCCTGATTATCACCGGCAGCGATGATCCCCTGTTGTCGATG
CTGGTAGCCAGACTCATGGGAAAAGTAGGCAGTCGCGAACTGGTGAGTTACAGCGCCACTGGTTCACGTCTGGGACTGGA
ACTGCTCGCCAAGGGTTATGCCGATGTCTGTACCCTGCACTGGGGTAGCTTTGATGAGCGCAACATCCGCCATACCGGGC
TGCTAAAAGGCTATCAAAACCACCAGCAATGGATACTGGTCCACGGCTACAAGCGCGCTCAGGGGCTGATAGTGAGGCCG
GAGATGCATCACAGGGTGCAGGATCAGACAGAACTCTTTACCCAGCCGCTGCGTTGGGTAAGACGCCAGAATGGTGCAGG
CAGCCAGCAGCATCTGGAGCATTGGTTGATGACAAGGGGCATAGCCGCATCTGAGCTGGACGTGCGTTTTACGGCGTTGA
GTGAACGGGAGCTGGCGGGCTATATAGCCCGTGAAGACGCCGATATTGGCTTTGGCTGTCAGGCGGTGGCCAGAGAGAGT
GGCCTGGCCTTCGTGCCACTGCTGACCGAGTCCTTTGATTTTGTGATGTCGCAGGGCATCTATTTCCGCCGCCAGTTACA
ACAACTGCTGGGCATGCTGACCGCCCCCGACACCCGCCAGGTAGCGGCCATGTTGGGCGGTTACGACTTAAGTGGCTCCG
GGCAGCTGCTCTGGTCCCAGGGACAGTAA

Upstream 100 bases:

>100_bases
TCACCCTCATCGCCAGAGCAAAAGGCCGGCACTTTTTGGTATATCACGGCGCCGAGACCATAGATTTTGATGCAACCCCA
GGGAAGACAGGACAAGGATA

Downstream 100 bases:

>100_bases
TCAGGTAACAGACTCAAAGCGCCAGGCCAGTATCCGGGTGATTTTTTGCCCCTGCTGCATTTCTATCACCTTGATTTCAC
TGGCGCCGCGCTGCTCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Molybdenum Cofactor Synthesis Domain-Containing Protein; Molybdate Metabolism Transcriptional Regulator; Molybdenum Cofactor Biosynthesis Protein; Molybdopterin Biosynthesis Protein MoeA; Molybdopterin Biosynthesis MoeA Protein; Molybdopterin Biosynthesis Protein; LysR Family Transcriptional Regulator; Formate Dehydrogenase Regulator; Molybdate Transport Repressor Domain Protein; Molybdopterin Molybdochelatase; Transcriptional Regulator FdsR; Molybdate Metabolism LysR Family Transcription Regulator; Molybdenum Cofactor Biosynthesis

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTDEVQLVYMSAKQVAEYLDLNEKKVYAMANDRILPATKVTGKWLFPKVLIDRWVMDSCHSGMLTDRLIITGSDDPLLSM
LVARLMGKVGSRELVSYSATGSRLGLELLAKGYADVCTLHWGSFDERNIRHTGLLKGYQNHQQWILVHGYKRAQGLIVRP
EMHHRVQDQTELFTQPLRWVRRQNGAGSQQHLEHWLMTRGIAASELDVRFTALSERELAGYIAREDADIGFGCQAVARES
GLAFVPLLTESFDFVMSQGIYFRRQLQQLLGMLTAPDTRQVAAMLGGYDLSGSGQLLWSQGQ

Sequences:

>Translated_302_residues
MTDEVQLVYMSAKQVAEYLDLNEKKVYAMANDRILPATKVTGKWLFPKVLIDRWVMDSCHSGMLTDRLIITGSDDPLLSM
LVARLMGKVGSRELVSYSATGSRLGLELLAKGYADVCTLHWGSFDERNIRHTGLLKGYQNHQQWILVHGYKRAQGLIVRP
EMHHRVQDQTELFTQPLRWVRRQNGAGSQQHLEHWLMTRGIAASELDVRFTALSERELAGYIAREDADIGFGCQAVARES
GLAFVPLLTESFDFVMSQGIYFRRQLQQLLGMLTAPDTRQVAAMLGGYDLSGSGQLLWSQGQ
>Mature_301_residues
TDEVQLVYMSAKQVAEYLDLNEKKVYAMANDRILPATKVTGKWLFPKVLIDRWVMDSCHSGMLTDRLIITGSDDPLLSML
VARLMGKVGSRELVSYSATGSRLGLELLAKGYADVCTLHWGSFDERNIRHTGLLKGYQNHQQWILVHGYKRAQGLIVRPE
MHHRVQDQTELFTQPLRWVRRQNGAGSQQHLEHWLMTRGIAASELDVRFTALSERELAGYIAREDADIGFGCQAVARESG
LAFVPLLTESFDFVMSQGIYFRRQLQQLLGMLTAPDTRQVAAMLGGYDLSGSGQLLWSQGQ

Specific function: Unknown

COG id: COG1910

COG function: function code P; Periplasmic molybdate-binding protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34049; Mature: 33917

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEVQLVYMSAKQVAEYLDLNEKKVYAMANDRILPATKVTGKWLFPKVLIDRWVMDSCH
CCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHC
SGMLTDRLIITGSDDPLLSMLVARLMGKVGSRELVSYSATGSRLGLELLAKGYADVCTLH
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHHHCCHHHEEEEE
WGSFDERNIRHTGLLKGYQNHQQWILVHGYKRAQGLIVRPEMHHRVQDQTELFTQPLRWV
CCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH
RRQNGAGSQQHLEHWLMTRGIAASELDVRFTALSERELAGYIAREDADIGFGCQAVARES
HHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHCC
GLAFVPLLTESFDFVMSQGIYFRRQLQQLLGMLTAPDTRQVAAMLGGYDLSGSGQLLWSQ
CCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEC
GQ
CC
>Mature Secondary Structure 
TDEVQLVYMSAKQVAEYLDLNEKKVYAMANDRILPATKVTGKWLFPKVLIDRWVMDSCH
CCCEEEEEHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHC
SGMLTDRLIITGSDDPLLSMLVARLMGKVGSRELVSYSATGSRLGLELLAKGYADVCTLH
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHEEECCCCHHHHHHHHHCCHHHEEEEE
WGSFDERNIRHTGLLKGYQNHQQWILVHGYKRAQGLIVRPEMHHRVQDQTELFTQPLRWV
CCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHH
RRQNGAGSQQHLEHWLMTRGIAASELDVRFTALSERELAGYIAREDADIGFGCQAVARES
HHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHCC
GLAFVPLLTESFDFVMSQGIYFRRQLQQLLGMLTAPDTRQVAAMLGGYDLSGSGQLLWSQ
CCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEC
GQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA