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The map label for this gene is fdhD [H]

Identifier: 119776751

GI number: 119776751

Start: 4259347

End: 4260195

Strand: Direct

Name: fdhD [H]

Synonym: Sama_3619

Alternate gene names: 119776751

Gene position: 4259347-4260195 (Clockwise)

Preceding gene: 119776738

Following gene: 119776752

Centisome position: 98.91

GC content: 55.48

Gene sequence:

>849_bases
ATGACGGCTGCAAAACCCCACACCCGCTTTATCAAGACCAGTGCCGAGGCCCCCTTAACCATTGCCGTGACTGCGGTGGA
CGAGACAGGCGCCGTGCTCGACAAGCAAATCGCCTGTGAGCGCCCCCTGACCCTGTATCTTAACTGGCGTCCCATAGTGA
CTCTGATGACCCTGGGAGCCCGCCCCGAAGCCCTGGCACTGGGATACATGAAAAATCAGGGATTTATCAAAGACCTGGCA
CAATTGGAGTCTGTGATTGTGGATTGGGCGGTCAGCTCGGCGGCCATCATCACCCGGGAGCAAACCGACGATCTGGACAA
AAAGTTATCGGAAAAAACCGTCACCACAGGCTGTGGTCAGGGCACGGTCTATGGCGATCTGATGGCGGGGCTCGACGACA
TCAAACTGCCGGTGCCCAGCCTCAAACAAAGCACCCTGTACGGGCTGCTGCGAAACATCAATGATTACAACGAAACCTAT
AAAAATGCCGGCGCAGTGCACGGCTGTGGCCTGTGTGAGGGTGAACAGATACGCTCCTTTGTTGAGGACGTGGGTCGCCA
CAATGCGGTAGACACGCTAGCCGGCGAGATGTGGCTAAAGGATGAAGTCGGCAGCGACAAGATTTTCTATACCACAGGCC
GCTTAACCTCGGAGATGGTGATAAAGGTGGCCAAAATGGGCATACCTGTATTGTTGTCCCGCAGCGGCGTGACCCAAATG
GGTCTGGAGCTGGCCCAACAACTCGGAATCACCCTCATCGCCAGAGCAAAAGGCCGGCACTTTTTGGTATATCACGGCGC
CGAGACCATAGATTTTGATGCAACCCCAGGGAAGACAGGACAAGGATAA

Upstream 100 bases:

>100_bases
GACGGAAAATCTGTCGGAAAACTGCGGTGGCGGATCACAAAATCCAGACAGGTACGATACTTGCTAAGCATCTGAGTAAG
TTACCCCTTTGAGGTTCGCC

Downstream 100 bases:

>100_bases
TGACCGACGAAGTGCAGCTGGTGTATATGAGCGCCAAACAGGTGGCCGAATATTTGGACCTCAATGAGAAAAAGGTCTAC
GCCATGGCCAATGACCGTAT

Product: formate dehydrogenase accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTAAKPHTRFIKTSAEAPLTIAVTAVDETGAVLDKQIACERPLTLYLNWRPIVTLMTLGARPEALALGYMKNQGFIKDLA
QLESVIVDWAVSSAAIITREQTDDLDKKLSEKTVTTGCGQGTVYGDLMAGLDDIKLPVPSLKQSTLYGLLRNINDYNETY
KNAGAVHGCGLCEGEQIRSFVEDVGRHNAVDTLAGEMWLKDEVGSDKIFYTTGRLTSEMVIKVAKMGIPVLLSRSGVTQM
GLELAQQLGITLIARAKGRHFLVYHGAETIDFDATPGKTGQG

Sequences:

>Translated_282_residues
MTAAKPHTRFIKTSAEAPLTIAVTAVDETGAVLDKQIACERPLTLYLNWRPIVTLMTLGARPEALALGYMKNQGFIKDLA
QLESVIVDWAVSSAAIITREQTDDLDKKLSEKTVTTGCGQGTVYGDLMAGLDDIKLPVPSLKQSTLYGLLRNINDYNETY
KNAGAVHGCGLCEGEQIRSFVEDVGRHNAVDTLAGEMWLKDEVGSDKIFYTTGRLTSEMVIKVAKMGIPVLLSRSGVTQM
GLELAQQLGITLIARAKGRHFLVYHGAETIDFDATPGKTGQG
>Mature_281_residues
TAAKPHTRFIKTSAEAPLTIAVTAVDETGAVLDKQIACERPLTLYLNWRPIVTLMTLGARPEALALGYMKNQGFIKDLAQ
LESVIVDWAVSSAAIITREQTDDLDKKLSEKTVTTGCGQGTVYGDLMAGLDDIKLPVPSLKQSTLYGLLRNINDYNETYK
NAGAVHGCGLCEGEQIRSFVEDVGRHNAVDTLAGEMWLKDEVGSDKIFYTTGRLTSEMVIKVAKMGIPVLLSRSGVTQMG
LELAQQLGITLIARAKGRHFLVYHGAETIDFDATPGKTGQG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=240, Percent_Identity=27.5, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30548; Mature: 30416

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAKPHTRFIKTSAEAPLTIAVTAVDETGAVLDKQIACERPLTLYLNWRPIVTLMTLGA
CCCCCCCHHHEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHHEECCC
RPEALALGYMKNQGFIKDLAQLESVIVDWAVSSAAIITREQTDDLDKKLSEKTVTTGCGQ
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
GTVYGDLMAGLDDIKLPVPSLKQSTLYGLLRNINDYNETYKNAGAVHGCGLCEGEQIRSF
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
VEDVGRHNAVDTLAGEMWLKDEVGSDKIFYTTGRLTSEMVIKVAKMGIPVLLSRSGVTQM
HHHHHCCCHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHH
GLELAQQLGITLIARAKGRHFLVYHGAETIDFDATPGKTGQG
HHHHHHHCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCC
>Mature Secondary Structure 
TAAKPHTRFIKTSAEAPLTIAVTAVDETGAVLDKQIACERPLTLYLNWRPIVTLMTLGA
CCCCCCHHHEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEEEECCCHHHHHEECCC
RPEALALGYMKNQGFIKDLAQLESVIVDWAVSSAAIITREQTDDLDKKLSEKTVTTGCGQ
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCC
GTVYGDLMAGLDDIKLPVPSLKQSTLYGLLRNINDYNETYKNAGAVHGCGLCEGEQIRSF
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
VEDVGRHNAVDTLAGEMWLKDEVGSDKIFYTTGRLTSEMVIKVAKMGIPVLLSRSGVTQM
HHHHHCCCHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHH
GLELAQQLGITLIARAKGRHFLVYHGAETIDFDATPGKTGQG
HHHHHHHCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]