| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yliJ [C]
Identifier: 119776680
GI number: 119776680
Start: 4180580
End: 4181233
Strand: Reverse
Name: yliJ [C]
Synonym: Sama_3548
Alternate gene names: 119776680
Gene position: 4181233-4180580 (Counterclockwise)
Preceding gene: 119776681
Following gene: 119776677
Centisome position: 97.1
GC content: 53.82
Gene sequence:
>654_bases ATGGAGCTCTTTTACCACCCGTTGTCGCGATATTCCCAAAAAGTTCTGCTTGGATTGTATGAAAAGCAGGTCAACTTTTA TCCCCGGGTCACTGAGCTCAGGGATCCCATACAACGTCAGACATTCAGCAAGATTTACCCTCCCTGCAAGCTGCCACTGC TTAAATGCTCTGATGGCAGCCTGTTACCCGAATCGACCATCATCATCGAATACCTGGATCAACATATACCCGGCGGAACC CGCCTGTTGCCAAAAGACAGCGCCGACTGCCTGAGGGTGCGTTTATGGGACAGGATTATCGATAACGACATCAGCAATCA GCTGTTTTTGCTGGAGCAGCAATTGAGCATGGCACCTGAACATCGCAATGAGCTGGCCATGGCACAGGTCAAACAGCGTT TGCTGCAGGTATTGGCCAGCATTGATGATGAACTGGCCAATTCCCATTGGTTGGTGGGGGATGGCTTTACCCTGGCTGAC TGCGCCCTGGTGCCCTGTCTTGAACCCGCGTTTGAGCTTCTGTCCCTGCTGGAGTTGGAAAACCTCTGCCGTTACCGCCA GCAGGCAAAAATCCGCGGCGCCTGGGAGCTGGTGGCCGAGGAGGCACAGCTCGCCGCCGCCGAAGAGACTAGCGGACTCA AACTCATTCCTTAG
Upstream 100 bases:
>100_bases AGAGTGCGGGTATTTCTCGACTTTCTGAAGGAGCGGTTGATCCAATCCCGCTAAAACCAACTAAATTAAACAAAGGGCGT TTGATTGGGAGCCGGATTCC
Downstream 100 bases:
>100_bases CTGTTACGCTCTTTCTTGAGCTGCAAAAAAGCCTTCCATTTCTGCACTTCGGGCGACAACTCAGGTGCGTCGCCTTCATA GCCCGCTTCACGCACCAGTT
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Ta Family; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGSLLPESTIIIEYLDQHIPGGT RLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPEHRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLAD CALVPCLEPAFELLSLLELENLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP
Sequences:
>Translated_217_residues MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGSLLPESTIIIEYLDQHIPGGT RLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPEHRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLAD CALVPCLEPAFELLSLLELENLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP >Mature_217_residues MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGSLLPESTIIIEYLDQHIPGGT RLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPEHRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLAD CALVPCLEPAFELLSLLELENLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24789; Mature: 24789
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC LLPESTIIIEYLDQHIPGGTRLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPE CCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH HRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLADCALVPCLEPAFELLSLLELE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH NLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC LLPESTIIIEYLDQHIPGGTRLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPE CCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH HRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLADCALVPCLEPAFELLSLLELE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH NLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA