The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776676

Identifier: 119776676

GI number: 119776676

Start: 4176165

End: 4176770

Strand: Reverse

Name: 119776676

Synonym: Sama_3544

Alternate gene names: NA

Gene position: 4176770-4176165 (Counterclockwise)

Preceding gene: 119776677

Following gene: 119776675

Centisome position: 97.0

GC content: 58.25

Gene sequence:

>606_bases
ATGTCACCTCTCAACCGCCTTTCATTTTGGTTTATGCCATGGCTGCTGGTCACCTTATGGGTGGGCGCGCCTTCAACCCT
GCTTGCCCGCCACGTCGTGGACGAAGGCGCCAGCGAATATGAATCCCTTATCAAGGCCACACCAGCGGCGCCGGAAGAGT
CTGTACCGGGTCAGTCTGCTGCCGACACTCAGGTGCTGAATAATCAAAGCTTGCTCAGGCCGCGCCAACAGAGCAGAGAA
ACGGCCCTCGACAGTGAAGGGCGTCCGCTTGCCATACCCACAGAGGTCAAGCCTGCCATGGAATTTGGGCCCGAATCCCG
TGACTGGCAGTGGGAAGGTAGCAGGGATAAACCGGTTTCCACAGACAAACGCAGCAAGGTATCCAAAACGTCATCGGACA
AAGGTCGTGGTAAGGTTGCCAACGATCCTAACTGCCGCTGGCTGGATACCCGGATTTCGCAGCTGGAAGACTTACTTGCT
TCCAGTGGCGGCGGTGCCCACCATCAGGATGAACTGAAGGCGAGAATGGGAGAGTGGCGTTGCCTCAAGTGCGGCGCCGA
CGGCCCAAAGCAAGGTGACCACTCGCGCTGCCAATACCGCCGCTGA

Upstream 100 bases:

>100_bases
CTACACTTGTGAAACACAGATGGGGCCGGATTGCCCCATGGTTGCAGACAGATGCCGCAGGTAAACGTCAGCGCCTGCAT
CACCAACAGGAGGACAGGGA

Downstream 100 bases:

>100_bases
GCCCTCTGTGAGCCCCAGTCCTGTGACAAACTGACTCACAGGCCGGTCTTTGCTCTGGTCTAGGTGCAAAAAGCTCCCTA
CAATTGAGCCTTTGCCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSPLNRLSFWFMPWLLVTLWVGAPSTLLARHVVDEGASEYESLIKATPAAPEESVPGQSAADTQVLNNQSLLRPRQQSRE
TALDSEGRPLAIPTEVKPAMEFGPESRDWQWEGSRDKPVSTDKRSKVSKTSSDKGRGKVANDPNCRWLDTRISQLEDLLA
SSGGGAHHQDELKARMGEWRCLKCGADGPKQGDHSRCQYRR

Sequences:

>Translated_201_residues
MSPLNRLSFWFMPWLLVTLWVGAPSTLLARHVVDEGASEYESLIKATPAAPEESVPGQSAADTQVLNNQSLLRPRQQSRE
TALDSEGRPLAIPTEVKPAMEFGPESRDWQWEGSRDKPVSTDKRSKVSKTSSDKGRGKVANDPNCRWLDTRISQLEDLLA
SSGGGAHHQDELKARMGEWRCLKCGADGPKQGDHSRCQYRR
>Mature_200_residues
SPLNRLSFWFMPWLLVTLWVGAPSTLLARHVVDEGASEYESLIKATPAAPEESVPGQSAADTQVLNNQSLLRPRQQSRET
ALDSEGRPLAIPTEVKPAMEFGPESRDWQWEGSRDKPVSTDKRSKVSKTSSDKGRGKVANDPNCRWLDTRISQLEDLLAS
SGGGAHHQDELKARMGEWRCLKCGADGPKQGDHSRCQYRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22368; Mature: 22237

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLNRLSFWFMPWLLVTLWVGAPSTLLARHVVDEGASEYESLIKATPAAPEESVPGQSA
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
ADTQVLNNQSLLRPRQQSRETALDSEGRPLAIPTEVKPAMEFGPESRDWQWEGSRDKPVS
CHHHHHCCHHHHCCHHHHHHHHCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCC
TDKRSKVSKTSSDKGRGKVANDPNCRWLDTRISQLEDLLASSGGGAHHQDELKARMGEWR
CCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
CLKCGADGPKQGDHSRCQYRR
EEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPLNRLSFWFMPWLLVTLWVGAPSTLLARHVVDEGASEYESLIKATPAAPEESVPGQSA
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
ADTQVLNNQSLLRPRQQSRETALDSEGRPLAIPTEVKPAMEFGPESRDWQWEGSRDKPVS
CHHHHHCCHHHHCCHHHHHHHHCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCC
TDKRSKVSKTSSDKGRGKVANDPNCRWLDTRISQLEDLLASSGGGAHHQDELKARMGEWR
CCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
CLKCGADGPKQGDHSRCQYRR
EEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA