Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yqaE [C]

Identifier: 119776670

GI number: 119776670

Start: 4169634

End: 4169801

Strand: Direct

Name: yqaE [C]

Synonym: Sama_3538

Alternate gene names: 119776670

Gene position: 4169634-4169801 (Clockwise)

Preceding gene: 119776668

Following gene: 119776671

Centisome position: 96.83

GC content: 45.83

Gene sequence:

>168_bases
ATGGATACCAATAAACTACTGCTGGTGATCATCGCCATATTGCTGCCTCCCGTGGCGGTATTTTTAAAAGAAGGTGCGGG
AAAGCATCTGCTGATCAATATTATTTTGTGTCTGTTTTTCTGGGTTCCCGGCCTGTTGCACGCCCTGTGGGTCGTAACTA
AAAGCTAA

Upstream 100 bases:

>100_bases
AGCCGTCGTAAGGGGAGAATGTCAGTTTTTTGTCCGACAAGTCTTGCCATTTTTCGGCCCAGTTGCGAAGTTAGCCAGGT
AGTCCAAGCAAGGAGATCTT

Downstream 100 bases:

>100_bases
AACACCCTCAAATGCACTGTGAGATGACAGCCCCGTAGCGGGGCTTTTTTATGGATGAATTTAGTTAATCCAATTTGTGG
ACATTCGCTGTCTAAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MDTNKLLLVIIAILLPPVAVFLKEGAGKHLLINIILCLFFWVPGLLHALWVVTKS

Sequences:

>Translated_55_residues
MDTNKLLLVIIAILLPPVAVFLKEGAGKHLLINIILCLFFWVPGLLHALWVVTKS
>Mature_55_residues
MDTNKLLLVIIAILLPPVAVFLKEGAGKHLLINIILCLFFWVPGLLHALWVVTKS

Specific function: Unknown

COG id: COG0401

COG function: function code S; Uncharacterized homolog of Blt101

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6107; Mature: 6107

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS01309 UPF0057

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNKLLLVIIAILLPPVAVFLKEGAGKHLLINIILCLFFWVPGLLHALWVVTKS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTNKLLLVIIAILLPPVAVFLKEGAGKHLLINIILCLFFWVPGLLHALWVVTKS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA