| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is modB [H]
Identifier: 119776662
GI number: 119776662
Start: 4162881
End: 4163558
Strand: Direct
Name: modB [H]
Synonym: Sama_3530
Alternate gene names: 119776662
Gene position: 4162881-4163558 (Clockwise)
Preceding gene: 119776661
Following gene: 119776663
Centisome position: 96.67
GC content: 55.31
Gene sequence:
>678_bases ATGGATTGGCAGTCGCTTTGGCTCTCAGGCAAACTGGCGCTGGTGACAGTGCTAATCCTCCTGCCACTGTGCGTATTTGC CGGACGCGCCCTTGCCTACCATCAGTTCCGCGGTAAAAGCCTGATTGAGGCTCTCATCATGGTGCCACTGGTATTGCCCC CTACAGTGGTAGGTTACTACCTGCTGGTCAGCTTCGGCAGCGAGAGTTGGCTCGGCCAATGGCTCAGAAATACCTTCGGC ATTGAGCTGGTGTTCCATTTCTCTGGTCTGGTACTGGCATCAATCTTGGTCAATATCCCCTTTGCCTTGCAGCCCATACA GCGGGCCTTCGAAGCCATTCCCGTGGATGTTCGCGACGCGGCTGCCTGTTGTGGCATGAGTAAAAGTAAAATCCTCACCC GTATTGAACTGCCGATGATCTGGCCCGGCCTGGTCACGGCGTTGGTGCTCACCTTCTCCCATGTACTGGGAGAATTTGGT GTGGTGCTGATGATGGGTGGCAATATCAGCGGCGAAACCAAAACCATCTCCATCGCCATCTACGACAGCGTCCAGGCGTT TGACTTTGATGCCGCCGGGATCATGTCACTTATCCTGCTGCTTTTTGCCATCAGTGCCCTGGCGCTGACGACCAGTCTTT CTCGTCGAATGGGAGGTCAGCATGAGCGGCAGCACTGA
Upstream 100 bases:
>100_bases CCGCCAATGCATTTTATGTGTATTTACAGGGTGACGAGGCACGTAAAGTCTTCGCCGACTATGGTTTCTCACTGCCACCA AAGGCACACGGAGCGCCCTG
Downstream 100 bases:
>100_bases GCTTCGGGTCCAGATTAGGCAAACCAAAGGCATACGTATCGAGGCCGATTTTAGCTGCCGTGCCGGTGAATTTTTGGCTG TGGTTGGGCCTTCGGGGGGC
Product: molybdenum ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLGQWLRNTFG IELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFG VVLMMGGNISGETKTISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH
Sequences:
>Translated_225_residues MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLGQWLRNTFG IELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFG VVLMMGGNISGETKTISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH >Mature_225_residues MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLGQWLRNTFG IELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFG VVLMMGGNISGETKTISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=184, Percent_Identity=38.5869565217391, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788764, Length=188, Percent_Identity=30.3191489361702, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082099, Length=220, Percent_Identity=28.6363636363636, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786254, Length=229, Percent_Identity=26.6375545851528, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24593; Mature: 24593
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYY CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH LLVSFGSESWLGQWLRNTFGIELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH AACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAI HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE YDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH ECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYY CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH LLVSFGSESWLGQWLRNTFGIELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH AACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAI HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE YDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH ECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]