Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is modA [H]

Identifier: 119776661

GI number: 119776661

Start: 4162093

End: 4162881

Strand: Direct

Name: modA [H]

Synonym: Sama_3529

Alternate gene names: 119776661

Gene position: 4162093-4162881 (Clockwise)

Preceding gene: 119776660

Following gene: 119776662

Centisome position: 96.65

GC content: 57.16

Gene sequence:

>789_bases
ATGATGTTAATGCGTCTGCTTGTACTGCTTACCCTGCTGGCGTCAGGTGCATTGGGATTTGCCCGTGCCGATACGGTCAC
AGTGGCGGCGGCAGCCAACATTAAGTTTGCCATGGAAGACATAGTCCGCGGTTTTGAGCAACACTCTGGGCATAAACTCA
GGGTCAGTTACGGCTCATCGGGGAACTTTGCTTCTCAGCTGCGCCACGGCGCCCCATTCGAGCTGTTTCTTTCCGCCGAC
GAGCAGTATGTAAGCCGGCTGCAAGAGGCAGGCGTGGTGCAAGACAAGGGCGTTATCTACGCCTATGGCCGGTTGGCTTT
GGTGGCAGCCAAATCCTCGCCGCTGACGCTGGACAATGAGTTTGACGGTTTGCGGCAACTTCTGAAAACCGGCGAGCTCA
AGCGCTTTGCACTGGCCAATCCGGATTTAGCCCCCTATGGCGAACGAGCCAAGGCCCTGCTGCAACAGGCAGGTCTGTGG
GATGCCATTAAAGACAAATTGGTGCTGGGAGAAAACGTGTCCCAGGCGGCGCAATTTGCGATTTCCGGCTCGGCTCAGGG
CGGCATAGTGGCACTGTCGCTGGCGGTAGCGCCCCAGTTTCGTGCCAAGGCCAATTACCTCCCTATCCCGGAAGACCAGC
ATCAACCACTGGCACAGCGCATGGTGCTATTGCCCGGAGCGTCTGCCGCCGCCAATGCATTTTATGTGTATTTACAGGGT
GACGAGGCACGTAAAGTCTTCGCCGACTATGGTTTCTCACTGCCACCAAAGGCACACGGAGCGCCCTGA

Upstream 100 bases:

>100_bases
AAACCAGTGACAAGGGCCAGGGCTGGGTCGAGGCCCGCGATGCCGACGATCAGGCCGCCAAGGCTTGGGAGCAATAAACA
ACCCCCGCGAAGGACCGAAG

Downstream 100 bases:

>100_bases
TGGATTGGCAGTCGCTTTGGCTCTCAGGCAAACTGGCGCTGGTGACAGTGCTAATCCTCCTGCCACTGTGCGTATTTGCC
GGACGCGCCCTTGCCTACCA

Product: molybdenum ABC transporter periplasmic molybdenum-binding protein

Products: ADP; phosphate; MoO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MMLMRLLVLLTLLASGALGFARADTVTVAAAANIKFAMEDIVRGFEQHSGHKLRVSYGSSGNFASQLRHGAPFELFLSAD
EQYVSRLQEAGVVQDKGVIYAYGRLALVAAKSSPLTLDNEFDGLRQLLKTGELKRFALANPDLAPYGERAKALLQQAGLW
DAIKDKLVLGENVSQAAQFAISGSAQGGIVALSLAVAPQFRAKANYLPIPEDQHQPLAQRMVLLPGASAAANAFYVYLQG
DEARKVFADYGFSLPPKAHGAP

Sequences:

>Translated_262_residues
MMLMRLLVLLTLLASGALGFARADTVTVAAAANIKFAMEDIVRGFEQHSGHKLRVSYGSSGNFASQLRHGAPFELFLSAD
EQYVSRLQEAGVVQDKGVIYAYGRLALVAAKSSPLTLDNEFDGLRQLLKTGELKRFALANPDLAPYGERAKALLQQAGLW
DAIKDKLVLGENVSQAAQFAISGSAQGGIVALSLAVAPQFRAKANYLPIPEDQHQPLAQRMVLLPGASAAANAFYVYLQG
DEARKVFADYGFSLPPKAHGAP
>Mature_262_residues
MMLMRLLVLLTLLASGALGFARADTVTVAAAANIKFAMEDIVRGFEQHSGHKLRVSYGSSGNFASQLRHGAPFELFLSAD
EQYVSRLQEAGVVQDKGVIYAYGRLALVAAKSSPLTLDNEFDGLRQLLKTGELKRFALANPDLAPYGERAKALLQQAGLW
DAIKDKLVLGENVSQAAQFAISGSAQGGIVALSLAVAPQFRAKANYLPIPEDQHQPLAQRMVLLPGASAAANAFYVYLQG
DEARKVFADYGFSLPPKAHGAP

Specific function: Involved in the transport of molybdenum into the cell [H]

COG id: COG0725

COG function: function code P; ABC-type molybdate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein modA family [H]

Homologues:

Organism=Escherichia coli, GI1786979, Length=258, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005950
- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 28074; Mature: 28074

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLMRLLVLLTLLASGALGFARADTVTVAAAANIKFAMEDIVRGFEQHSGHKLRVSYGSS
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC
GNFASQLRHGAPFELFLSADEQYVSRLQEAGVVQDKGVIYAYGRLALVAAKSSPLTLDNE
CCHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCEECCH
FDGLRQLLKTGELKRFALANPDLAPYGERAKALLQQAGLWDAIKDKLVLGENVSQAAQFA
HHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHEEECCCHHHHHHHH
ISGSAQGGIVALSLAVAPQFRAKANYLPIPEDQHQPLAQRMVLLPGASAAANAFYVYLQG
CCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHEEECCCCCCCCCEEEEEEEC
DEARKVFADYGFSLPPKAHGAP
CCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MMLMRLLVLLTLLASGALGFARADTVTVAAAANIKFAMEDIVRGFEQHSGHKLRVSYGSS
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC
GNFASQLRHGAPFELFLSADEQYVSRLQEAGVVQDKGVIYAYGRLALVAAKSSPLTLDNE
CCHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCEECCH
FDGLRQLLKTGELKRFALANPDLAPYGERAKALLQQAGLWDAIKDKLVLGENVSQAAQFA
HHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHEEECCCHHHHHHHH
ISGSAQGGIVALSLAVAPQFRAKANYLPIPEDQHQPLAQRMVLLPGASAAANAFYVYLQG
CCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHEEECCCCCCCCCEEEEEEEC
DEARKVFADYGFSLPPKAHGAP
CCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; MoO42- [Periplasm]; H2O [C]

Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384683; 7665518 [H]