| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is 119776648
Identifier: 119776648
GI number: 119776648
Start: 4150616
End: 4151038
Strand: Direct
Name: 119776648
Synonym: Sama_3516
Alternate gene names: NA
Gene position: 4150616-4151038 (Clockwise)
Preceding gene: 119776647
Following gene: 119776649
Centisome position: 96.39
GC content: 55.56
Gene sequence:
>423_bases ATGACTGATTTCAGGGTTACCAGCACACTTGCCGACATGAACCTGTCCGTCATCCACGGCTTCTTACAACATTCCTATTG GGCCAAAGGGATCCCGGAAGCCACATTACGCCGCGCCCTGGAAAATAGCCTCTGTTTCGGGCTCTTCTGCGGAAGTGACC AAATTGGCTTTGCGCGTATGATCACCGATAAGGCAACCTTCGCGTATCTGGCCGATGTTTTTGTGCTGGAAAGCCACCGC GGACGAGGCGGCTCCAAGGTACTGATGCAGGCCGTGATGGCGCATCCAGAACTCACCGGGCTACGACGCATGATGCTGGC CACCAGCGATGCACATGGTCTGTATCGTCAGTTTGGTTTTACCGACCTGGGCAACCCGGGGATCATGATGGAGATACACC GCCCGAACGTATACCAGCCCTGA
Upstream 100 bases:
>100_bases CCCGATGCATTTGAAGTGGCTGTGGTGTATGAAATTCAAGACGGTCTTATCCAAACTCTGTGGAGTTTTGGCGCAGACAA AATTCAGGGAATACCCAGTC
Downstream 100 bases:
>100_bases TTCGTTCGACTTCAAGGCGGATTTCGGCTACGTATTTGTCGTCGTAGTCCAAACGTTCAAATTCCTCGAGGCAGGCCAGG TACATCGCCAGCCTGCGCTC
Product: histone acetyltransferase HPA2/related acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; GCN5-Related N-Acetyltransferase Protein; Histone Acetyltransferase HPA2/Related Acetyltransferase; Acetyltransferase Domain-Containing Protein; N-Acetylglutamate Synthase; Acetyltransferase GNAT Family Protein; GCN5 N-Acetyltransferase; Acetyltransferase Family Protein; Acetyltransferase GCN5-Related; Acetyltransferase Gnat Family; Spermine/Spermidine Acetyltransferase; N-Acetyltransferase Gnat Family Protein; GCN5-Related Protein N-Acetyltransferase
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARMITDKATFAYLADVFVLESHR GRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGFTDLGNPGIMMEIHRPNVYQP
Sequences:
>Translated_140_residues MTDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARMITDKATFAYLADVFVLESHR GRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGFTDLGNPGIMMEIHRPNVYQP >Mature_139_residues TDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARMITDKATFAYLADVFVLESHRG RGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGFTDLGNPGIMMEIHRPNVYQP
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15643; Mature: 15512
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARM CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHH ITDKATFAYLADVFVLESHRGRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC TDLGNPGIMMEIHRPNVYQP CCCCCCCEEEEECCCCCCCC >Mature Secondary Structure TDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARM CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHH ITDKATFAYLADVFVLESHRGRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC TDLGNPGIMMEIHRPNVYQP CCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA