| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ynaD [H]
Identifier: 119776649
GI number: 119776649
Start: 4151459
End: 4152019
Strand: Direct
Name: ynaD [H]
Synonym: Sama_3517
Alternate gene names: 119776649
Gene position: 4151459-4152019 (Clockwise)
Preceding gene: 119776648
Following gene: 119776650
Centisome position: 96.41
GC content: 57.4
Gene sequence:
>561_bases ATGCTCACAGCTCCCCAACTTAAGGCAACGCGCTTGGCGCTGCGCCCACTGTCCCAACAAGACCTGGCGGCGTTCACCCT CTACCGCCAACAGCCAGAGGTAGCCCGCTATCAAAGCTGGTCAGATTACGACATGGGCAAAGCCCAAGCCCTGCTGAATG CACAGCTGGGCGGTACATTCGGCGCTGCCGGTTCCTGGTTTCAGATAGCCATAGTCGACAAAGACACGGATGCTTTGCTG GGCGACCTGGCACTGCATTTTATCGACGAGAACCAGCTGGAAATCGGTTTTACCCTGGCTCCCCGACATCAGGGCCAAGG CCTGGCGAAGGAAGCCGTCACCTGTCTGCTGGATTGGTATCTGCTACAGAATGGGGGCCACAGGGTGACTGCCATCTGTG ATACAGAGAACCTGGCCAGTTGGCGACTGCTGGAAGCCCTGGGCTTCAGGCGCGAAGCCCACTGGGTGGAAAATATCTTT TTTAAAGGGGCGTGGGGCTCAGAGTATCAATATGCCATGCTCGCCCGGGAGTGGCGCTCTCGCTCTGTGAATCGCTTTTA A
Upstream 100 bases:
>100_bases CAATTGGCGCAGAGGCTTACGCCAAGAGAAGACACACATCGCAACGTGTTGATTTTAATTAAATTACAACATGCCGACCG GTTAGAACCAAGGACATTCC
Downstream 100 bases:
>100_bases AACCAAAGCGCGACCCAGATCAGGAAACCGTACGCCAATCCCCCGAGTCATTCACGCCACACTTTGCAGCCCCGCCAAGG GCGGTTACCATCAAACCATG
Product: ribosomal-protein-serine acetyltransferase
Products: CoA +ribosomal-protein N-acetyl-L-alanine [C]
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLTAPQLKATRLALRPLSQQDLAAFTLYRQQPEVARYQSWSDYDMGKAQALLNAQLGGTFGAAGSWFQIAIVDKDTDALL GDLALHFIDENQLEIGFTLAPRHQGQGLAKEAVTCLLDWYLLQNGGHRVTAICDTENLASWRLLEALGFRREAHWVENIF FKGAWGSEYQYAMLAREWRSRSVNRF
Sequences:
>Translated_186_residues MLTAPQLKATRLALRPLSQQDLAAFTLYRQQPEVARYQSWSDYDMGKAQALLNAQLGGTFGAAGSWFQIAIVDKDTDALL GDLALHFIDENQLEIGFTLAPRHQGQGLAKEAVTCLLDWYLLQNGGHRVTAICDTENLASWRLLEALGFRREAHWVENIF FKGAWGSEYQYAMLAREWRSRSVNRF >Mature_186_residues MLTAPQLKATRLALRPLSQQDLAAFTLYRQQPEVARYQSWSDYDMGKAQALLNAQLGGTFGAAGSWFQIAIVDKDTDALL GDLALHFIDENQLEIGFTLAPRHQGQGLAKEAVTCLLDWYLLQNGGHRVTAICDTENLASWRLLEALGFRREAHWVENIF FKGAWGSEYQYAMLAREWRSRSVNRF
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S5. Plays Also A Role In The Temperature Regulation Of Pap Pilin Transcription. [C]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.128 [C]
Molecular weight: Translated: 21081; Mature: 21081
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAPQLKATRLALRPLSQQDLAAFTLYRQQPEVARYQSWSDYDMGKAQALLNAQLGGTF CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCC GAAGSWFQIAIVDKDTDALLGDLALHFIDENQLEIGFTLAPRHQGQGLAKEAVTCLLDWY CCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH LLQNGGHRVTAICDTENLASWRLLEALGFRREAHWVENIFFKGAWGSEYQYAMLAREWRS HHHCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHH RSVNRF CCCCCC >Mature Secondary Structure MLTAPQLKATRLALRPLSQQDLAAFTLYRQQPEVARYQSWSDYDMGKAQALLNAQLGGTF CCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHCCCCC GAAGSWFQIAIVDKDTDALLGDLALHFIDENQLEIGFTLAPRHQGQGLAKEAVTCLLDWY CCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHH LLQNGGHRVTAICDTENLASWRLLEALGFRREAHWVENIFFKGAWGSEYQYAMLAREWRS HHHCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHH RSVNRF CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; ribosomal-protein L-alanine [C]
Specific reaction: Acetyl-CoA + ribosomal-protein L-alanine = CoA +ribosomal-protein N-acetyl-L-alanine [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]