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The map label for this gene is ftsY [H]

Identifier: 119776600

GI number: 119776600

Start: 4097738

End: 4099429

Strand: Reverse

Name: ftsY [H]

Synonym: Sama_3468

Alternate gene names: 119776600

Gene position: 4099429-4097738 (Counterclockwise)

Preceding gene: 119776603

Following gene: 119776599

Centisome position: 95.2

GC content: 57.57

Gene sequence:

>1692_bases
ATGACCGATGAAGCCTTAGCTTCGAAAACGGCCCAGTGCCAACACAGACCGGTACCACAGATGTCAAAGAAAGGTTTTTT
CTCCTGGTTCCGCCGGGACAAGGATGATGCGGCCGCAAAACAGGCCGAAGCAGAACACGCGATTGTCGAACAGGTTCAGG
CAGAAAGCGCTGCGGCCGAACAAGCGGAGCGTGAAGCCGCTGAACAGGCGGCAGCTGAAGTTACACGTTTAGAAGCTGAG
CAGCTGGAAGCCGAGCGCATCGCCGCCGAACAAGCCGAGCAGGAACGTATTGCTGCCGAGCAGGCCGCAGCCGAAGCTGC
CCGCTTGGAAGCTGAGCGCCAGGAAGAAGCTCGTCTTGCAGCTGAGCAGCTGGAAGCAGAGCGCATCGCCGCCGAACAAG
CCGAGCAGGAACGCATTGCTGCCGAGCAGGCCGCAGCCGAAGCTGCCCGCTTGGAAGCTGAGCGCCAGAAAGAAGCTCGT
CTTGCAGCAGAGCAGCTGGAAGCCGAGCGCATCGCCGCCGAACAAGCCGAGCAGGAACGCATTGCTGCCGAGCAGGCCGC
AGCCGAAGCTGCCCGCTTGGAAGCTGAGCGCCAGGAAGAAGCTCGTCTTGCAGCAGAGCAGCTGGAAGCCGAGCGCATTG
CCGCCGAACAGGCAGAGCAGGAACGCATTGCTGCTGAGCAGAGCGCTGCTGAAGCCGCATCGGTGCAAACTGAACAGGCA
GAAGAAGTTCAGCCAGAGCCTCAGGCCAAGCCGGTGAAAGAGGGCTTTTTTGCTCGTCTGAAGCGTGGCCTGATGCGCAC
CAGCGAGAATATTGGCAGTGGCTTTATCGGCCTGTTCCGCGGCAAGAAAATTGATGATGAGCTGTTTGAAGAGCTGGAAG
AGCAGCTGCTGATTGCCGACGTGGGTGTAGAAACCACCTCAAAGCTGATCAAGAGCCTGACCGAGCATGCCAGCCGCAGA
CAGCTGAAAGATGCCGAGGCTTTATACGAACTGCTGCGTGAAGAAATGCAGCGCACTCTGGAGCCGGTCAGCGTGCCTCT
GGTGCCGGAAAATGCGCAGGGTCCTTATGTGATCCTGATGGTGGGTGTAAACGGTGTGGGTAAAACCACCACCATTGGCA
AGCTTGCCAAGCAGTACCAGAGTCAGGGCAAGAGCGTGATGCTGGCTGCAGGTGATACCTTCCGCGCCGCTGCCGTTGAG
CAGCTGCAGGTGTGGGGGCAGCGCAACAATATTCCCGTGGTTGCCCAGCATACCGGTGCCGACAGTGCCTCTGTGCTGTT
TGACGCATTGCAATCGGCCAAGGCCAAGGGTGTGGATGTGTTGATTTGCGACACCGCCGGTCGTCTGCAGAACAAAAACC
ATCTGATGGAAGAGCTGAAAAAAGTTGTGAGGGTAATGAAGAAGCTCGACGAGAGCGCGCCCCACGAAGTGATGCTGACG
CTGGATGCCAGCACGGGCCAGAATGCCATCAGCCAGGCCAAGCTGTTCCAGGAAGCCGTCGGTGTAACCGGTATCTCCAT
TACCAAGCTCGATGGTACCGCCAAAGGCGGGGTGATCTTTGCCATTGCCGATAAATTTGGTATTCCTATCCGTTACATAG
GTGTTGGCGAACAGATAGACGATCTGCGAGTATTTAACGCCCGCGACTTTATCGATGCCCTGTTCAGTCAGGAGAAAACG
GATAACACATGA

Upstream 100 bases:

>100_bases
TTTGCCCGAAGAAAGAAAGTGGTAGACTAGGCCACCCCGTAAAAGGTCGTCATTTTAACGTAAAGCGTATCCTCAGGGAT
ACCTTCCCAGACGGCATGGA

Downstream 100 bases:

>100_bases
TTCGATTTGAGCAGGTCAGCAAGGTCTACCCCGGGGGGCAGAAGGCCCTGTCCGATGTGAATTTCCATCTGCGCCGAGGC
GAGATGGCGTTTCTCACCGG

Product: cell division protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MTDEALASKTAQCQHRPVPQMSKKGFFSWFRRDKDDAAAKQAEAEHAIVEQVQAESAAAEQAEREAAEQAAAEVTRLEAE
QLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQKEAR
LAAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQSAAEAASVQTEQA
EEVQPEPQAKPVKEGFFARLKRGLMRTSENIGSGFIGLFRGKKIDDELFEELEEQLLIADVGVETTSKLIKSLTEHASRR
QLKDAEALYELLREEMQRTLEPVSVPLVPENAQGPYVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVE
QLQVWGQRNNIPVVAQHTGADSASVLFDALQSAKAKGVDVLICDTAGRLQNKNHLMEELKKVVRVMKKLDESAPHEVMLT
LDASTGQNAISQAKLFQEAVGVTGISITKLDGTAKGGVIFAIADKFGIPIRYIGVGEQIDDLRVFNARDFIDALFSQEKT
DNT

Sequences:

>Translated_563_residues
MTDEALASKTAQCQHRPVPQMSKKGFFSWFRRDKDDAAAKQAEAEHAIVEQVQAESAAAEQAEREAAEQAAAEVTRLEAE
QLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQKEAR
LAAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQSAAEAASVQTEQA
EEVQPEPQAKPVKEGFFARLKRGLMRTSENIGSGFIGLFRGKKIDDELFEELEEQLLIADVGVETTSKLIKSLTEHASRR
QLKDAEALYELLREEMQRTLEPVSVPLVPENAQGPYVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVE
QLQVWGQRNNIPVVAQHTGADSASVLFDALQSAKAKGVDVLICDTAGRLQNKNHLMEELKKVVRVMKKLDESAPHEVMLT
LDASTGQNAISQAKLFQEAVGVTGISITKLDGTAKGGVIFAIADKFGIPIRYIGVGEQIDDLRVFNARDFIDALFSQEKT
DNT
>Mature_562_residues
TDEALASKTAQCQHRPVPQMSKKGFFSWFRRDKDDAAAKQAEAEHAIVEQVQAESAAAEQAEREAAEQAAAEVTRLEAEQ
LEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQKEARL
AAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQSAAEAASVQTEQAE
EVQPEPQAKPVKEGFFARLKRGLMRTSENIGSGFIGLFRGKKIDDELFEELEEQLLIADVGVETTSKLIKSLTEHASRRQ
LKDAEALYELLREEMQRTLEPVSVPLVPENAQGPYVILMVGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVEQ
LQVWGQRNNIPVVAQHTGADSASVLFDALQSAKAKGVDVLICDTAGRLQNKNHLMEELKKVVRVMKKLDESAPHEVMLTL
DASTGQNAISQAKLFQEAVGVTGISITKLDGTAKGGVIFAIADKFGIPIRYIGVGEQIDDLRVFNARDFIDALFSQEKTD
NT

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=275, Percent_Identity=32.7272727272727, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI226371618, Length=200, Percent_Identity=36.5, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI23308697, Length=235, Percent_Identity=32.7659574468085, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI295424842, Length=227, Percent_Identity=33.0396475770925, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI89061728, Length=145, Percent_Identity=31.7241379310345, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1789874, Length=326, Percent_Identity=77.3006134969325, Blast_Score=501, Evalue=1e-143,
Organism=Escherichia coli, GI1788963, Length=301, Percent_Identity=33.8870431893688, Blast_Score=143, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=284, Percent_Identity=29.5774647887324, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=319, Percent_Identity=29.153605015674, Blast_Score=117, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=285, Percent_Identity=33.3333333333333, Blast_Score=131, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320498, Length=314, Percent_Identity=26.7515923566879, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI17647949, Length=285, Percent_Identity=30.8771929824561, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24641198, Length=301, Percent_Identity=27.906976744186, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 61498; Mature: 61367

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEALASKTAQCQHRPVPQMSKKGFFSWFRRDKDDAAAKQAEAEHAIVEQVQAESAAAE
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEREAAEQAAAEVTRLEAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQKEARLAAEQLEAERIAAEQAEQER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQSAAEAASVQTEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVQPEPQAKPVKEGFFARLKRGLMRTSENIGSGFIGLFRGKKIDDELFEELEEQLLIAD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH
VGVETTSKLIKSLTEHASRRQLKDAEALYELLREEMQRTLEPVSVPLVPENAQGPYVILM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
VGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVVAQHTGA
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCC
DSASVLFDALQSAKAKGVDVLICDTAGRLQNKNHLMEELKKVVRVMKKLDESAPHEVMLT
CHHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LDASTGQNAISQAKLFQEAVGVTGISITKLDGTAKGGVIFAIADKFGIPIRYIGVGEQID
EECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHH
DLRVFNARDFIDALFSQEKTDNT
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDEALASKTAQCQHRPVPQMSKKGFFSWFRRDKDDAAAKQAEAEHAIVEQVQAESAAAE
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAEREAAEQAAAEVTRLEAEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQEEARLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQLEAERIAAEQAEQERIAAEQAAAEAARLEAERQKEARLAAEQLEAERIAAEQAEQER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAEQAAAEAARLEAERQEEARLAAEQLEAERIAAEQAEQERIAAEQSAAEAASVQTEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVQPEPQAKPVKEGFFARLKRGLMRTSENIGSGFIGLFRGKKIDDELFEELEEQLLIAD
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH
VGVETTSKLIKSLTEHASRRQLKDAEALYELLREEMQRTLEPVSVPLVPENAQGPYVILM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
VGVNGVGKTTTIGKLAKQYQSQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVVAQHTGA
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCC
DSASVLFDALQSAKAKGVDVLICDTAGRLQNKNHLMEELKKVVRVMKKLDESAPHEVMLT
CHHHHHHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LDASTGQNAISQAKLFQEAVGVTGISITKLDGTAKGGVIFAIADKFGIPIRYIGVGEQID
EECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHH
DLRVFNARDFIDALFSQEKTDNT
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]