| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776582
Identifier: 119776582
GI number: 119776582
Start: 4080937
End: 4081272
Strand: Direct
Name: 119776582
Synonym: Sama_3450
Alternate gene names: NA
Gene position: 4080937-4081272 (Clockwise)
Preceding gene: 119776581
Following gene: 119776585
Centisome position: 94.77
GC content: 56.85
Gene sequence:
>336_bases ATGATCTACAGTCAATTCCACACTCCCCCCTTGCGTGAGCGCTTCAGCGGATTCCGCGGGCTGGCCATGTTTATCGCAGG ATTTGTGGTGCTGGGTCTCAGCCTGGTGATGCTGCCCTTTATCTTATTGGCAGGCGCTGTGGCTTTTGCATTACTCAGTG TGTTTGGCAGGATTTGGCTTGGCAAACTCCAGCGCCGGGCTCAGCAAGCCCAGGCAGCGCAGTCATCCCAGAGTACCGTC GATGGGGAAGAAGCTTTTGTTCGCTTTCGTGACCGTGATCTGTTCCGCCCGCGCCCCCATCAGGGACGCACCTTCGAACA CGATCCTACCGAGTAA
Upstream 100 bases:
>100_bases TGGTGACAAACTCAAATGGACGCAAGATTAACCATATTTCACGTGATTATGGTGCACATTTTACGCAGACTGTCAGCACG ACATTCGCCCAGGAGGCATT
Downstream 100 bases:
>100_bases TGGCAAGTAAAGATATCACTGCTCCGGGGCACTCTCACCCTGCCCCGGCATCTCCAACAGCAGTTCTTTGGCTCTCTCCA GGGCCTTTTTTTCGTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MIYSQFHTPPLRERFSGFRGLAMFIAGFVVLGLSLVMLPFILLAGAVAFALLSVFGRIWLGKLQRRAQQAQAAQSSQSTV DGEEAFVRFRDRDLFRPRPHQGRTFEHDPTE
Sequences:
>Translated_111_residues MIYSQFHTPPLRERFSGFRGLAMFIAGFVVLGLSLVMLPFILLAGAVAFALLSVFGRIWLGKLQRRAQQAQAAQSSQSTV DGEEAFVRFRDRDLFRPRPHQGRTFEHDPTE >Mature_111_residues MIYSQFHTPPLRERFSGFRGLAMFIAGFVVLGLSLVMLPFILLAGAVAFALLSVFGRIWLGKLQRRAQQAQAAQSSQSTV DGEEAFVRFRDRDLFRPRPHQGRTFEHDPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12582; Mature: 12582
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSQFHTPPLRERFSGFRGLAMFIAGFVVLGLSLVMLPFILLAGAVAFALLSVFGRIWL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKLQRRAQQAQAAQSSQSTVDGEEAFVRFRDRDLFRPRPHQGRTFEHDPTE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIYSQFHTPPLRERFSGFRGLAMFIAGFVVLGLSLVMLPFILLAGAVAFALLSVFGRIWL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKLQRRAQQAQAAQSSQSTVDGEEAFVRFRDRDLFRPRPHQGRTFEHDPTE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA