Click here to switch to the map view.

The map label for this gene is 119776575

Identifier: 119776575

GI number: 119776575

Start: 4073820

End: 4075241

Strand: Reverse

Name: 119776575

Synonym: Sama_3443

Alternate gene names: NA

Gene position: 4075241-4073820 (Counterclockwise)

Preceding gene: 119776576

Following gene: 119776574

Centisome position: 94.64

GC content: 55.84

Gene sequence:

>1422_bases
ATGATGCAATATAAACCTCTGTTGATTGTGGCAGCTCTGGCCCTGGCCGGCTGCGCCGCTACCCAGGACGTTAAGCACAC
TCAGGAACCTGCTGCCGCAGCCTTTCAGCTGCCCGCCTATGAAAAGGTGACCCTGGATAACGGCCTGACGGTGTTTTTGA
TGCAGCAAAAAGAAGTGCCCCTGATCACAGTAAACGCCGTAGTACGTGCCGGTGCGGTGAACGACACCAGTGCCGGTATC
TCTGCGCTGACGGCCGAAGGCCTGATGCTCGGCAGCGCTGGCAAGTCCAAGCGTGATATCGAAAACCAGGTGGATTTTCT
GGGTGCCAGCTTAAGCGCAGAAGCCGGTAAGGAAGGCAGCTATATCAGTGCCAAGTTCATGGCCAAAGATCTGGACACCA
TGCTGCCGCTGTTTGCCGATGTGCTGCTGCGTCCCGACTTCGATGCCACCGAATTCGACAAGCTCAAGCAGCGCGAAGTG
GGTGGACTGATCCAGGCCAAAGAAAGCCCAAGAGCCGTGGTTGGCAACTACTTCGGCAAACTGGTGTATGGCCAGCACCC
CTATGGCAACGCCAGCGGTGGTAACAGTGAGTCGGTTGCCGCTATTACTCTGCCACAGGTTCGTGCCTTCTATACCGGCT
TCTATCAGCCCGGTAACACCTCTATTTCCGTGGTGGGTGATTTTGATGTGGCGGACATGAAGGCCCAGCTGAAGCGCACC
TTCGGTGATTGGCGCTCAGATGCAGCTCCCCAACAGCAATCCCTGAAACAAGGTCTGCCGGTGCTGGCAAAGAGCCGTGT
GCTCTTGGTGGACAAGCCAGACGCCATGGAGACCACTTTCCTGATTGGTGGCATGGGCATTTCTGAAGATAACCCCGACG
CTGTGGGCTTAACCGTGGTAAACACTATTCTGGGTGGTCGCTTTACCTCCTGGCTCAATGACGAGCTCAGGGTGAATGCC
GGTCTGACCTATGGTGCCCGCTCCGGTTTTGCGTCTTACCGCGACAGTGGTCTGTTCCAGATAAGCACCTTCACCAAAAC
CGACACCACGGAAGCGGCCATCGACCTGGCGCTCAAGACCTACGCCCGCCTGTGGGAGCAGGGCATAGATCAGGCAACTC
TGGATTCCGCCAAGGCCTACGTGAAGGGTCAGTTCCCGCCCAGATTTGAAACCAGCGGCCAGCTGGCCGGGCTGTTGTCT
GACATGTACCTCTATGGCTTTGATAACAGTTATATCAATGACTTCGAGCGTAAAGTTGACAGCCTGACCCTGGAGGAAAC
GCAGCGTTTGATTGATACCTACTTCCCCAAAGACAAGCTGCAGTTTGTGCTGATTGGCAATGCGGCCAAGGTGGCACCTA
TCGCCGCCAAATACGGGGAAGTCAACCAGGTGAACATCAAGGATGTAGGATTCGGCGGCTAA

Upstream 100 bases:

>100_bases
ACAAGGTTACCATCGCCGACATTCAGCGCGTGGCGCAAACCTATCTGAAACGGGCCAACCGCAGTGTGGCCGTGCTGTCT
GCCGAGGAGGAAATGGACAA

Downstream 100 bases:

>100_bases
CACCGAATCCCTTCAGAGAAAAAGGGCCTGCTGTTGCAGGCCCTTTTCATTTTCTGGGCAGCGCGGCGAAGAGAATTATC
TGTTCTACACTTAAGTCCAA

Product: peptidase M16-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MMQYKPLLIVAALALAGCAATQDVKHTQEPAAAAFQLPAYEKVTLDNGLTVFLMQQKEVPLITVNAVVRAGAVNDTSAGI
SALTAEGLMLGSAGKSKRDIENQVDFLGASLSAEAGKEGSYISAKFMAKDLDTMLPLFADVLLRPDFDATEFDKLKQREV
GGLIQAKESPRAVVGNYFGKLVYGQHPYGNASGGNSESVAAITLPQVRAFYTGFYQPGNTSISVVGDFDVADMKAQLKRT
FGDWRSDAAPQQQSLKQGLPVLAKSRVLLVDKPDAMETTFLIGGMGISEDNPDAVGLTVVNTILGGRFTSWLNDELRVNA
GLTYGARSGFASYRDSGLFQISTFTKTDTTEAAIDLALKTYARLWEQGIDQATLDSAKAYVKGQFPPRFETSGQLAGLLS
DMYLYGFDNSYINDFERKVDSLTLEETQRLIDTYFPKDKLQFVLIGNAAKVAPIAAKYGEVNQVNIKDVGFGG

Sequences:

>Translated_473_residues
MMQYKPLLIVAALALAGCAATQDVKHTQEPAAAAFQLPAYEKVTLDNGLTVFLMQQKEVPLITVNAVVRAGAVNDTSAGI
SALTAEGLMLGSAGKSKRDIENQVDFLGASLSAEAGKEGSYISAKFMAKDLDTMLPLFADVLLRPDFDATEFDKLKQREV
GGLIQAKESPRAVVGNYFGKLVYGQHPYGNASGGNSESVAAITLPQVRAFYTGFYQPGNTSISVVGDFDVADMKAQLKRT
FGDWRSDAAPQQQSLKQGLPVLAKSRVLLVDKPDAMETTFLIGGMGISEDNPDAVGLTVVNTILGGRFTSWLNDELRVNA
GLTYGARSGFASYRDSGLFQISTFTKTDTTEAAIDLALKTYARLWEQGIDQATLDSAKAYVKGQFPPRFETSGQLAGLLS
DMYLYGFDNSYINDFERKVDSLTLEETQRLIDTYFPKDKLQFVLIGNAAKVAPIAAKYGEVNQVNIKDVGFGG
>Mature_473_residues
MMQYKPLLIVAALALAGCAATQDVKHTQEPAAAAFQLPAYEKVTLDNGLTVFLMQQKEVPLITVNAVVRAGAVNDTSAGI
SALTAEGLMLGSAGKSKRDIENQVDFLGASLSAEAGKEGSYISAKFMAKDLDTMLPLFADVLLRPDFDATEFDKLKQREV
GGLIQAKESPRAVVGNYFGKLVYGQHPYGNASGGNSESVAAITLPQVRAFYTGFYQPGNTSISVVGDFDVADMKAQLKRT
FGDWRSDAAPQQQSLKQGLPVLAKSRVLLVDKPDAMETTFLIGGMGISEDNPDAVGLTVVNTILGGRFTSWLNDELRVNA
GLTYGARSGFASYRDSGLFQISTFTKTDTTEAAIDLALKTYARLWEQGIDQATLDSAKAYVKGQFPPRFETSGQLAGLLS
DMYLYGFDNSYINDFERKVDSLTLEETQRLIDTYFPKDKLQFVLIGNAAKVAPIAAKYGEVNQVNIKDVGFGG

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=423, Percent_Identity=19.1489361702128, Blast_Score=70, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323192, Length=365, Percent_Identity=22.4657534246575, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 51045; Mature: 51045

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQYKPLLIVAALALAGCAATQDVKHTQEPAAAAFQLPAYEKVTLDNGLTVFLMQQKEVP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCEEEEECCCCEEEEEECCCCC
LITVNAVVRAGAVNDTSAGISALTAEGLMLGSAGKSKRDIENQVDFLGASLSAEAGKEGS
EEEEEHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCC
YISAKFMAKDLDTMLPLFADVLLRPDFDATEFDKLKQREVGGLIQAKESPRAVVGNYFGK
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHH
LVYGQHPYGNASGGNSESVAAITLPQVRAFYTGFYQPGNTSISVVGDFDVADMKAQLKRT
EEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHH
FGDWRSDAAPQQQSLKQGLPVLAKSRVLLVDKPDAMETTFLIGGMGISEDNPDAVGLTVV
HHHHCCCCCCHHHHHHCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHH
NTILGGRFTSWLNDELRVNAGLTYGARSGFASYRDSGLFQISTFTKTDTTEAAIDLALKT
HHHHCCHHHHHCCCCEEEECCEEECCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
YARLWEQGIDQATLDSAKAYVKGQFPPRFETSGQLAGLLSDMYLYGFDNSYINDFERKVD
HHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHH
SLTLEETQRLIDTYFPKDKLQFVLIGNAAKVAPIAAKYGEVNQVNIKDVGFGG
HCCHHHHHHHHHHHCCCCCEEEEEECCCCHHCHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MMQYKPLLIVAALALAGCAATQDVKHTQEPAAAAFQLPAYEKVTLDNGLTVFLMQQKEVP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCEEEEECCCCEEEEEECCCCC
LITVNAVVRAGAVNDTSAGISALTAEGLMLGSAGKSKRDIENQVDFLGASLSAEAGKEGS
EEEEEHHHCCCCCCCCCCCHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCC
YISAKFMAKDLDTMLPLFADVLLRPDFDATEFDKLKQREVGGLIQAKESPRAVVGNYFGK
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHH
LVYGQHPYGNASGGNSESVAAITLPQVRAFYTGFYQPGNTSISVVGDFDVADMKAQLKRT
EEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHH
FGDWRSDAAPQQQSLKQGLPVLAKSRVLLVDKPDAMETTFLIGGMGISEDNPDAVGLTVV
HHHHCCCCCCHHHHHHCCCCEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHH
NTILGGRFTSWLNDELRVNAGLTYGARSGFASYRDSGLFQISTFTKTDTTEAAIDLALKT
HHHHCCHHHHHCCCCEEEECCEEECCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
YARLWEQGIDQATLDSAKAYVKGQFPPRFETSGQLAGLLSDMYLYGFDNSYINDFERKVD
HHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHH
SLTLEETQRLIDTYFPKDKLQFVLIGNAAKVAPIAAKYGEVNQVNIKDVGFGG
HCCHHHHHHHHHHHCCCCCEEEEEECCCCHHCHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]