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The map label for this gene is pqqL [C]

Identifier: 119776576

GI number: 119776576

Start: 4075238

End: 4076569

Strand: Reverse

Name: pqqL [C]

Synonym: Sama_3444

Alternate gene names: 119776576

Gene position: 4076569-4075238 (Counterclockwise)

Preceding gene: 119776577

Following gene: 119776575

Centisome position: 94.67

GC content: 54.43

Gene sequence:

>1332_bases
ATGAAGCGAACGCTATCAGCCCTGGCTCTGGCAATGGGGCTGGCAATGGCCCCCATGATGAGCCAGGCCACCACTGCCGC
CGATATCAAGAGTTTTACTCTGGATAACGGCATGAAAATCATGGTGCTGGAAGATGCATCCATCCCCAACGCCAACATGT
ATCTGTTCTGGAAAGTGGGCTCGCGCAATGAAGCTCCGGGTATTACCGGTATCTCTCACTTCTTCGAGCACATGATGTTT
AACGGCTCGAAAAAGTACGGTCCCAAGATGTTTGACCGGACCATGGAAGCCGCCGGTGGCGCCAACAACGCCTACACTAC
CGAAAACCTGACCGTGTACACCGACTGGTTCCCCGCCTCGGGCCTTGAAACCATTTTCGACCTGGAAGCCGACCGCATCG
CCAATCTGGACATCAATGCCGACATGGTTGAAAGCGAGCGCGGCGTGGTGACGTCTGAGCGCAGCACTGGCCTTGAAAAC
TCCAACATCCGCGCCCTGATGGAGGAGCTTAAAGGTGTAGCTTTCCGTGCTCACCCTTACAGCTGGCCCGTGATTGGCCA
TGAGTCAGATATTGCCGCCTGGACCCTGGACGACCTGGTGCAGTATCACAAGACTTACTACGCCCCCAACAATGCCGTCG
TGGTGATTGCCGGTGATGTGAAACTGGACGAAGTTAAGTCCCTGGCAAACCGGTATTTCGCCCCTATTCCTGCCCAGGCA
CCTCCCCGTGAAGTGAAAACCGTGGAGCCGCTGCAAAAGGGTGAGCGCAGAACCTTTATTCACAAGCCTTCTGCCAGCAC
GCCCAACGTGATGATGGCCTACCATGTTCCAGCAACATCCCACGAAGACTACTATGCTCTTGAATTGCTGGCGGGCATTT
TGAGCGCCGGTAACAGCTCGCGCCTGTATCAATCTATGGTCGACAGTCAGTTGGCGCTGGAAGCAGATACCTATTTCCCC
ATGTCGTTCGATCCCAACCTCTTCTACCTTTACGCCGTGGGTGCTCCCGGTGTGAAGGCCGATGCGCTTGAGCAGGAGCT
TATTGCCCAAACCAATCGCATCGCCGCCGAGGGTGTAACCGAGCAAGAGCTTGAAAAAATCAAAAACATCAAGCTGATGG
ATTTCTATCGCACCATGGAAACCATCAACGGTAAAGCCAATACCCTGGGTACCTACGAACTCTTCTTTGGCAGCTTCGAT
AAGTTGTTCAATGCCCCTGAGGCCTACAACAAGGTTACCATCGCCGACATTCAGCGCGTGGCGCAAACCTATCTGAAACG
GGCCAACCGCAGTGTGGCCGTGCTGTCTGCCGAGGAGGAAATGGACAAATGA

Upstream 100 bases:

>100_bases
CAATCTTGCTGTCCTCCCTTGCTGGCGCTGGTGAAATTGCTTTTAAATGGCGGATTAACCAAAGAAATACACCATTTAAC
TACTTGGAGCAGGAAGCGAG

Downstream 100 bases:

>100_bases
TGCAATATAAACCTCTGTTGATTGTGGCAGCTCTGGCCCTGGCCGGCTGCGCCGCTACCCAGGACGTTAAGCACACTCAG
GAACCTGCTGCCGCAGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKRTLSALALAMGLAMAPMMSQATTAADIKSFTLDNGMKIMVLEDASIPNANMYLFWKVGSRNEAPGITGISHFFEHMMF
NGSKKYGPKMFDRTMEAAGGANNAYTTENLTVYTDWFPASGLETIFDLEADRIANLDINADMVESERGVVTSERSTGLEN
SNIRALMEELKGVAFRAHPYSWPVIGHESDIAAWTLDDLVQYHKTYYAPNNAVVVIAGDVKLDEVKSLANRYFAPIPAQA
PPREVKTVEPLQKGERRTFIHKPSASTPNVMMAYHVPATSHEDYYALELLAGILSAGNSSRLYQSMVDSQLALEADTYFP
MSFDPNLFYLYAVGAPGVKADALEQELIAQTNRIAAEGVTEQELEKIKNIKLMDFYRTMETINGKANTLGTYELFFGSFD
KLFNAPEAYNKVTIADIQRVAQTYLKRANRSVAVLSAEEEMDK

Sequences:

>Translated_443_residues
MKRTLSALALAMGLAMAPMMSQATTAADIKSFTLDNGMKIMVLEDASIPNANMYLFWKVGSRNEAPGITGISHFFEHMMF
NGSKKYGPKMFDRTMEAAGGANNAYTTENLTVYTDWFPASGLETIFDLEADRIANLDINADMVESERGVVTSERSTGLEN
SNIRALMEELKGVAFRAHPYSWPVIGHESDIAAWTLDDLVQYHKTYYAPNNAVVVIAGDVKLDEVKSLANRYFAPIPAQA
PPREVKTVEPLQKGERRTFIHKPSASTPNVMMAYHVPATSHEDYYALELLAGILSAGNSSRLYQSMVDSQLALEADTYFP
MSFDPNLFYLYAVGAPGVKADALEQELIAQTNRIAAEGVTEQELEKIKNIKLMDFYRTMETINGKANTLGTYELFFGSFD
KLFNAPEAYNKVTIADIQRVAQTYLKRANRSVAVLSAEEEMDK
>Mature_443_residues
MKRTLSALALAMGLAMAPMMSQATTAADIKSFTLDNGMKIMVLEDASIPNANMYLFWKVGSRNEAPGITGISHFFEHMMF
NGSKKYGPKMFDRTMEAAGGANNAYTTENLTVYTDWFPASGLETIFDLEADRIANLDINADMVESERGVVTSERSTGLEN
SNIRALMEELKGVAFRAHPYSWPVIGHESDIAAWTLDDLVQYHKTYYAPNNAVVVIAGDVKLDEVKSLANRYFAPIPAQA
PPREVKTVEPLQKGERRTFIHKPSASTPNVMMAYHVPATSHEDYYALELLAGILSAGNSSRLYQSMVDSQLALEADTYFP
MSFDPNLFYLYAVGAPGVKADALEQELIAQTNRIAAEGVTEQELEKIKNIKLMDFYRTMETINGKANTLGTYELFFGSFD
KLFNAPEAYNKVTIADIQRVAQTYLKRANRSVAVLSAEEEMDK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=357, Percent_Identity=25.7703081232493, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI46593007, Length=347, Percent_Identity=24.7838616714697, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI155969707, Length=260, Percent_Identity=24.2307692307692, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1787770, Length=213, Percent_Identity=27.6995305164319, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI2367164, Length=244, Percent_Identity=26.2295081967213, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17553678, Length=425, Percent_Identity=23.7647058823529, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71999683, Length=224, Percent_Identity=27.6785714285714, Blast_Score=85, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6323192, Length=356, Percent_Identity=23.5955056179775, Blast_Score=80, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6323421, Length=255, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357875, Length=419, Percent_Identity=23.6276849642005, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24646943, Length=419, Percent_Identity=23.6276849642005, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI221513245, Length=217, Percent_Identity=24.4239631336406, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 49190; Mature: 49190

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLSALALAMGLAMAPMMSQATTAADIKSFTLDNGMKIMVLEDASIPNANMYLFWKVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEEEEEEC
SRNEAPGITGISHFFEHMMFNGSKKYGPKMFDRTMEAAGGANNAYTTENLTVYTDWFPAS
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCC
GLETIFDLEADRIANLDINADMVESERGVVTSERSTGLENSNIRALMEELKGVAFRAHPY
CCHHHHHCCHHHEECCCCCCHHHHCCCCCEECHHHCCCCCCHHHHHHHHHCCCEEEECCC
SWPVIGHESDIAAWTLDDLVQYHKTYYAPNNAVVVIAGDVKLDEVKSLANRYFAPIPAQA
CCCCCCCCCCCCEEEHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCC
PPREVKTVEPLQKGERRTFIHKPSASTPNVMMAYHVPATSHEDYYALELLAGILSAGNSS
CCCCCCHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCH
RLYQSMVDSQLALEADTYFPMSFDPNLFYLYAVGAPGVKADALEQELIAQTNRIAAEGVT
HHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
EQELEKIKNIKLMDFYRTMETINGKANTLGTYELFFGSFDKLFNAPEAYNKVTIADIQRV
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHCCHHHHCCCCHHHCEEHHHHHHHH
AQTYLKRANRSVAVLSAEEEMDK
HHHHHHHCCCCEEEEECHHHHCC
>Mature Secondary Structure
MKRTLSALALAMGLAMAPMMSQATTAADIKSFTLDNGMKIMVLEDASIPNANMYLFWKVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEEEEEEC
SRNEAPGITGISHFFEHMMFNGSKKYGPKMFDRTMEAAGGANNAYTTENLTVYTDWFPAS
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCC
GLETIFDLEADRIANLDINADMVESERGVVTSERSTGLENSNIRALMEELKGVAFRAHPY
CCHHHHHCCHHHEECCCCCCHHHHCCCCCEECHHHCCCCCCHHHHHHHHHCCCEEEECCC
SWPVIGHESDIAAWTLDDLVQYHKTYYAPNNAVVVIAGDVKLDEVKSLANRYFAPIPAQA
CCCCCCCCCCCCEEEHHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCC
PPREVKTVEPLQKGERRTFIHKPSASTPNVMMAYHVPATSHEDYYALELLAGILSAGNSS
CCCCCCHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCH
RLYQSMVDSQLALEADTYFPMSFDPNLFYLYAVGAPGVKADALEQELIAQTNRIAAEGVT
HHHHHHHHHHHEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
EQELEKIKNIKLMDFYRTMETINGKANTLGTYELFFGSFDKLFNAPEAYNKVTIADIQRV
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEHHHHHCCHHHHCCCCHHHCEEHHHHHHHH
AQTYLKRANRSVAVLSAEEEMDK
HHHHHHHCCCCEEEEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]