The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is abgT [H]

Identifier: 119776555

GI number: 119776555

Start: 4053158

End: 4054705

Strand: Reverse

Name: abgT [H]

Synonym: Sama_3423

Alternate gene names: 119776555

Gene position: 4054705-4053158 (Counterclockwise)

Preceding gene: 119776560

Following gene: 119776550

Centisome position: 94.16

GC content: 58.07

Gene sequence:

>1548_bases
ATGGAGACAGGTACGGCGACCCGGGAGGGAGGCCTCCTTGGCAAGTTTTTGAATGGCATCGAGAAGGCCGGGAATAAGCT
GCCGGATCCGGCAGTGATATTTTTGCTGGCCATGGTGCTGATTTGGGGTCTGTCGGCGCTGTTTTCCCGCTTTGAGTTCA
GCGCCATTGACCCCCGCACCGGCGAAGCCATTGTGGTGCATAACCTGCTGACCGGTGATTCGCTGGCGGGCTTCCTCGCC
AATATGGTGAAAACATTCACCTCGTTCGCGCCGCTGGGGGTGGTGCTGGTGGCCATGCTGGGGGTTGGGGTGGCCGAGCA
TTCGGGCTTTATCAATACCGGCCTGAAGATGATGCTCAAGGTGACACCGGCCAGGCTGCTGACACCATCCATCATACTGA
TTGCCATCGTCAGCCACACTGCGACGGATGCGGGCTATGTGCTGGTTATCCCGCTTGCCGGAGTGATTTTCTACGCCATG
GGTCGTCATCCACTGGCGGGCATTGCTGCGGCTTTTGCCGGGGTCTCCGGCGGTTTTGGCGCCAACTTTGTGCCCTCGGG
GCTGGATCCCTTGCTGCAAAGCTTTACCCAGAGCGCGGCGCAAATCATCGACCCGGAAATCGCCATCAACCCGCTGAATA
ACTGGTTCTTTGCCTCGGCGTCGAGCCTGCTGATTGTGCTGCTGGGCTGGTATCTCACCGACAAGGTGATTGAGCCGCGT
CTGGCGAATACCCCAATCGATGGAGATACTTCCAACCTACCCAAGTTCGACGAGGCTGGCACACGTGAGAAGCAGGGCTT
TTTGCTGGCTGTAACCGTGATGGTGGCTGGGCTGGTGCTCCTGTATCTGGCGGCAAGCCCGGCGGATTCTCCGCTAAGGG
CCAAGAGCGGTAATTTGTCTGACTTCAGTGCGCCCCTGATGCAATCGATAGTGCCGCTGATTTTCCTGCTGTTTTGGATC
CCCGGCGCCGTGTACGGCTTCTATGTGGGCACCTTCAAAAAGAGCAAGGACATGATAGATGCCATGTCCAAGTCCATGGG
CAGCATGGCCTATTACATAGTGATGGCCTTCTTCTGTGCCCTGTTTATTGCGGCTTTCAGCCAGTCCAATCTGGGGGCTT
TGCTGGCCATTGAAGGGGCCGAGGTGCTTAAGGCGTTGGCACTGCCAAGTGCGGTGACCATTGTCGGCATTATCTTCCTC
ACCGCCTTTGTGAACCTGTTTGTGGGCTCAAGCTCGGCCAAGTGGGCGCTGCTGGGGCCGATTTTTGTGCCCATGCTGAT
GCAGCTGAATATCTCCCCCGACCTGACCCAGGCGGCCTACCGGGTGGGCGACTCAGGTTCCAACATCATCACCCCGCTGA
TGCCTTACTTCCCGCTGGTGGTGGTGTATTGCCAGAAGTATGTGAAAAACACCGGCATAGGTACCTTGATTGCCATGATG
CTGCCGTTCTCGGTGGTGTTCCTGGTGGGCTGGACCGCCTTCCTGCTGCTGTACTGGACCCTGGGCTTCCCGCTGGGCCT
GCAGGCGAGCTACACCTACGGTCTGTAG

Upstream 100 bases:

>100_bases
ACTGCTGGAAAAGTGACTTTCCTTAAGTTGTATTTCATTCCTCCGTTCTAGGATGGTGGGTTAATTTAACAAAACCAAAA
TCAATAAAGGGAGCAACAGC

Downstream 100 bases:

>100_bases
GCTACGTAAGCTAAGGAAGGTGCGAATAAGTCCCGTGCTTGCTCTGCGTGTGCTTAAAGTGGATAGATGCAAGGCACAGT
TTGCAGCGAATGGCCCTAGT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
METGTATREGGLLGKFLNGIEKAGNKLPDPAVIFLLAMVLIWGLSALFSRFEFSAIDPRTGEAIVVHNLLTGDSLAGFLA
NMVKTFTSFAPLGVVLVAMLGVGVAEHSGFINTGLKMMLKVTPARLLTPSIILIAIVSHTATDAGYVLVIPLAGVIFYAM
GRHPLAGIAAAFAGVSGGFGANFVPSGLDPLLQSFTQSAAQIIDPEIAINPLNNWFFASASSLLIVLLGWYLTDKVIEPR
LANTPIDGDTSNLPKFDEAGTREKQGFLLAVTVMVAGLVLLYLAASPADSPLRAKSGNLSDFSAPLMQSIVPLIFLLFWI
PGAVYGFYVGTFKKSKDMIDAMSKSMGSMAYYIVMAFFCALFIAAFSQSNLGALLAIEGAEVLKALALPSAVTIVGIIFL
TAFVNLFVGSSSAKWALLGPIFVPMLMQLNISPDLTQAAYRVGDSGSNIITPLMPYFPLVVVYCQKYVKNTGIGTLIAMM
LPFSVVFLVGWTAFLLLYWTLGFPLGLQASYTYGL

Sequences:

>Translated_515_residues
METGTATREGGLLGKFLNGIEKAGNKLPDPAVIFLLAMVLIWGLSALFSRFEFSAIDPRTGEAIVVHNLLTGDSLAGFLA
NMVKTFTSFAPLGVVLVAMLGVGVAEHSGFINTGLKMMLKVTPARLLTPSIILIAIVSHTATDAGYVLVIPLAGVIFYAM
GRHPLAGIAAAFAGVSGGFGANFVPSGLDPLLQSFTQSAAQIIDPEIAINPLNNWFFASASSLLIVLLGWYLTDKVIEPR
LANTPIDGDTSNLPKFDEAGTREKQGFLLAVTVMVAGLVLLYLAASPADSPLRAKSGNLSDFSAPLMQSIVPLIFLLFWI
PGAVYGFYVGTFKKSKDMIDAMSKSMGSMAYYIVMAFFCALFIAAFSQSNLGALLAIEGAEVLKALALPSAVTIVGIIFL
TAFVNLFVGSSSAKWALLGPIFVPMLMQLNISPDLTQAAYRVGDSGSNIITPLMPYFPLVVVYCQKYVKNTGIGTLIAMM
LPFSVVFLVGWTAFLLLYWTLGFPLGLQASYTYGL
>Mature_515_residues
METGTATREGGLLGKFLNGIEKAGNKLPDPAVIFLLAMVLIWGLSALFSRFEFSAIDPRTGEAIVVHNLLTGDSLAGFLA
NMVKTFTSFAPLGVVLVAMLGVGVAEHSGFINTGLKMMLKVTPARLLTPSIILIAIVSHTATDAGYVLVIPLAGVIFYAM
GRHPLAGIAAAFAGVSGGFGANFVPSGLDPLLQSFTQSAAQIIDPEIAINPLNNWFFASASSLLIVLLGWYLTDKVIEPR
LANTPIDGDTSNLPKFDEAGTREKQGFLLAVTVMVAGLVLLYLAASPADSPLRAKSGNLSDFSAPLMQSIVPLIFLLFWI
PGAVYGFYVGTFKKSKDMIDAMSKSMGSMAYYIVMAFFCALFIAAFSQSNLGALLAIEGAEVLKALALPSAVTIVGIIFL
TAFVNLFVGSSSAKWALLGPIFVPMLMQLNISPDLTQAAYRVGDSGSNIITPLMPYFPLVVVYCQKYVKNTGIGTLIAMM
LPFSVVFLVGWTAFLLLYWTLGFPLGLQASYTYGL

Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]

COG id: COG2978

COG function: function code H; Putative p-aminobenzoyl-glutamate transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081879, Length=493, Percent_Identity=34.2799188640974, Blast_Score=301, Evalue=7e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004697
- InterPro:   IPR011540 [H]

Pfam domain/function: PF03806 ABG_transport [H]

EC number: NA

Molecular weight: Translated: 54783; Mature: 54783

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METGTATREGGLLGKFLNGIEKAGNKLPDPAVIFLLAMVLIWGLSALFSRFEFSAIDPRT
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GEAIVVHNLLTGDSLAGFLANMVKTFTSFAPLGVVLVAMLGVGVAEHSGFINTGLKMMLK
CCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH
VTPARLLTPSIILIAIVSHTATDAGYVLVIPLAGVIFYAMGRHPLAGIAAAFAGVSGGFG
HCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
ANFVPSGLDPLLQSFTQSAAQIIDPEIAINPLNNWFFASASSLLIVLLGWYLTDKVIEPR
CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LANTPIDGDTSNLPKFDEAGTREKQGFLLAVTVMVAGLVLLYLAASPADSPLRAKSGNLS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DFSAPLMQSIVPLIFLLFWIPGAVYGFYVGTFKKSKDMIDAMSKSMGSMAYYIVMAFFCA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFIAAFSQSNLGALLAIEGAEVLKALALPSAVTIVGIIFLTAFVNLFVGSSSAKWALLGP
HHHHHHCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
IFVPMLMQLNISPDLTQAAYRVGDSGSNIITPLMPYFPLVVVYCQKYVKNTGIGTLIAMM
HHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LPFSVVFLVGWTAFLLLYWTLGFPLGLQASYTYGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
METGTATREGGLLGKFLNGIEKAGNKLPDPAVIFLLAMVLIWGLSALFSRFEFSAIDPRT
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GEAIVVHNLLTGDSLAGFLANMVKTFTSFAPLGVVLVAMLGVGVAEHSGFINTGLKMMLK
CCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH
VTPARLLTPSIILIAIVSHTATDAGYVLVIPLAGVIFYAMGRHPLAGIAAAFAGVSGGFG
HCHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC
ANFVPSGLDPLLQSFTQSAAQIIDPEIAINPLNNWFFASASSLLIVLLGWYLTDKVIEPR
CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LANTPIDGDTSNLPKFDEAGTREKQGFLLAVTVMVAGLVLLYLAASPADSPLRAKSGNLS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DFSAPLMQSIVPLIFLLFWIPGAVYGFYVGTFKKSKDMIDAMSKSMGSMAYYIVMAFFCA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFIAAFSQSNLGALLAIEGAEVLKALALPSAVTIVGIIFLTAFVNLFVGSSSAKWALLGP
HHHHHHCCCCCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
IFVPMLMQLNISPDLTQAAYRVGDSGSNIITPLMPYFPLVVVYCQKYVKNTGIGTLIAMM
HHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LPFSVVFLVGWTAFLLLYWTLGFPLGLQASYTYGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]