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The map label for this gene is bkdR [H]

Identifier: 119776551

GI number: 119776551

Start: 4048733

End: 4049197

Strand: Direct

Name: bkdR [H]

Synonym: Sama_3419

Alternate gene names: 119776551

Gene position: 4048733-4049197 (Clockwise)

Preceding gene: 119776548

Following gene: 119776552

Centisome position: 94.02

GC content: 57.2

Gene sequence:

>465_bases
ATGGGCCAGCTGGATAAGAAAGACCTCGCTATCCTTGCCGCACTGCAACGCAATGGCCGTCAGAGCATCACGGAACTCGC
CGCCTCGGTAAACCTATCTGACACCCCCTGTTTAAGGCGTATTCGTCGCCTCGAGCAGGAAGGCTATATCACGGGGTACA
GCGCCGCCATTAACCACAGGAAAGCGGGCTTCGAGGTGATAGTCTATGCCTCGGTCAGGCTCAGCGAAAACTCCGACAGG
GCCGCCGAACAGTTCGAAGCTGCGGTTGCCCTGTTGCCGGAAGTGATGGAGTGTTCGGTGATAACCGGGGCCCACGATTA
CCTGCTCAAAATCGTTGCCAAAGACCTGCTGGCCTACGAGCGTTTCGTCAAAAAATCCCTCGGTAGCCTGCCGGGGGTAT
CGGGCATCGAGTCGACTCTGGTGCTCAAACAAACCTTTTGCCGCACGGCACTGCCATTGGACTGA

Upstream 100 bases:

>100_bases
ACAGAGAAACGGGGCATTTTCACCAAAGCGGGGCGACAAAGCTCTGTCTATTGGAGATAATCAATAATAATTAAACAATA
AATATCGGATTTCACTCATC

Downstream 100 bases:

>100_bases
CCAATCATTGCCGGTCTTGAGCGGCAACTGAAAATCCCCTAGTCTGGGAAAGCTTTCAAATTTAATGTCCCCAAGCCACG
TAAAGCTCATACAAAGGATT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGQLDKKDLAILAALQRNGRQSITELAASVNLSDTPCLRRIRRLEQEGYITGYSAAINHRKAGFEVIVYASVRLSENSDR
AAEQFEAAVALLPEVMECSVITGAHDYLLKIVAKDLLAYERFVKKSLGSLPGVSGIESTLVLKQTFCRTALPLD

Sequences:

>Translated_154_residues
MGQLDKKDLAILAALQRNGRQSITELAASVNLSDTPCLRRIRRLEQEGYITGYSAAINHRKAGFEVIVYASVRLSENSDR
AAEQFEAAVALLPEVMECSVITGAHDYLLKIVAKDLLAYERFVKKSLGSLPGVSGIESTLVLKQTFCRTALPLD
>Mature_153_residues
GQLDKKDLAILAALQRNGRQSITELAASVNLSDTPCLRRIRRLEQEGYITGYSAAINHRKAGFEVIVYASVRLSENSDRA
AEQFEAAVALLPEVMECSVITGAHDYLLKIVAKDLLAYERFVKKSLGSLPGVSGIESTLVLKQTFCRTALPLD

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=141, Percent_Identity=39.7163120567376, Blast_Score=114, Evalue=3e-27,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=32.4503311258278, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16883; Mature: 16752

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQLDKKDLAILAALQRNGRQSITELAASVNLSDTPCLRRIRRLEQEGYITGYSAAINHR
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCC
KAGFEVIVYASVRLSENSDRAAEQFEAAVALLPEVMECSVITGAHDYLLKIVAKDLLAYE
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RFVKKSLGSLPGVSGIESTLVLKQTFCRTALPLD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GQLDKKDLAILAALQRNGRQSITELAASVNLSDTPCLRRIRRLEQEGYITGYSAAINHR
CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCC
KAGFEVIVYASVRLSENSDRAAEQFEAAVALLPEVMECSVITGAHDYLLKIVAKDLLAYE
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RFVKKSLGSLPGVSGIESTLVLKQTFCRTALPLD
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]