The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776539

Identifier: 119776539

GI number: 119776539

Start: 4032248

End: 4033141

Strand: Reverse

Name: 119776539

Synonym: Sama_3407

Alternate gene names: NA

Gene position: 4033141-4032248 (Counterclockwise)

Preceding gene: 119776540

Following gene: 119776536

Centisome position: 93.66

GC content: 53.8

Gene sequence:

>894_bases
ATGATGAAGCTGCAAAGGCAATTCCTTGCTGCATTGTTGTTGTCGCTGAGTTTGCCCAGTACAGCCACAGAGCCACTGAC
GGTACGCTATGTGGATGCCAGCGTGATGAAGCGCAATCCGAACAACGCTTATTTTGGTCAGCTATTGCAACTGGCGCTGG
AGAAATCCAAAGCGAAATATGGCCCATATCAGCTGGCTCCACTCGACATAGATATCTCTCAGCGGCGCCATTTCAGGGAA
CTGAATAATGGTGTTATCAATGTGTTCTGGACCATGACCAATTATCGCCGCGAACTCGATGCCCTGCCGGTACGTGTCCC
CCTTATGAAGGGGGTTTATGGGCTCAGGTTGCTGGCTGCCAACGAGCATGATCTGGCAACACTTGCCGGTGTGCAGAGCC
TGGGCGATTTTGCGCCCTTCACCTTTCTTCAGGGGCGCGATTGGCCAGATACACAAATCCTCAGACTCAACCGGCTGGAA
GTCTCGACGGACGTATCTGAAGGCGACATGTACGAGTTTACCCGCCGCCACCCCGGTTACCTTTTCCCCAGGGCGGTCAC
CGAGCTGTATTCAGAGACTGAAAGTCGCAATATCAGTGAGTTGGCGGGAGAAAGCCACCTGCTGATCCGTTACCCGGCAG
TGATGTATTTCTTCGTTGCCAAACAGGATACCTTATTGGCGGAAAGGCTGGAGTACGGCTTGAAAGCCGCCATGGCAGAT
GGCAGTTTTGATCAGCTCTTTTATGGCTTTGCACCCCACAAGGCGGCGCTGAAGCAGGCGCAGCTGCATCGGCGCAAACT
GATGACGCTCGATAATCCTCTCTTGCCCGAATCGGCGATGCCGGCCGAGGTGTTAAAGCAGCAGGATGAAGTGATAGCGC
ATCTCGAGCAGTGA

Upstream 100 bases:

>100_bases
GGGCGGCCCGGTATCCTGAGGATGGACAGGATATCACTGAATTGCTGCATGTTGCCGACAAGGCCATGTACGAAGACAAG
CAGCGCATCAAAGGGGAAAG

Downstream 100 bases:

>100_bases
ACCGCACAGCCACAAAAAAGCCCCCATTTGGGGGCTTTTAGCTTACATGGAGGCGATAAAGTTACTGGCCTGCGGCTTCC
ATGGCGGCGATAAACTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MMKLQRQFLAALLLSLSLPSTATEPLTVRYVDASVMKRNPNNAYFGQLLQLALEKSKAKYGPYQLAPLDIDISQRRHFRE
LNNGVINVFWTMTNYRRELDALPVRVPLMKGVYGLRLLAANEHDLATLAGVQSLGDFAPFTFLQGRDWPDTQILRLNRLE
VSTDVSEGDMYEFTRRHPGYLFPRAVTELYSETESRNISELAGESHLLIRYPAVMYFFVAKQDTLLAERLEYGLKAAMAD
GSFDQLFYGFAPHKAALKQAQLHRRKLMTLDNPLLPESAMPAEVLKQQDEVIAHLEQ

Sequences:

>Translated_297_residues
MMKLQRQFLAALLLSLSLPSTATEPLTVRYVDASVMKRNPNNAYFGQLLQLALEKSKAKYGPYQLAPLDIDISQRRHFRE
LNNGVINVFWTMTNYRRELDALPVRVPLMKGVYGLRLLAANEHDLATLAGVQSLGDFAPFTFLQGRDWPDTQILRLNRLE
VSTDVSEGDMYEFTRRHPGYLFPRAVTELYSETESRNISELAGESHLLIRYPAVMYFFVAKQDTLLAERLEYGLKAAMAD
GSFDQLFYGFAPHKAALKQAQLHRRKLMTLDNPLLPESAMPAEVLKQQDEVIAHLEQ
>Mature_297_residues
MMKLQRQFLAALLLSLSLPSTATEPLTVRYVDASVMKRNPNNAYFGQLLQLALEKSKAKYGPYQLAPLDIDISQRRHFRE
LNNGVINVFWTMTNYRRELDALPVRVPLMKGVYGLRLLAANEHDLATLAGVQSLGDFAPFTFLQGRDWPDTQILRLNRLE
VSTDVSEGDMYEFTRRHPGYLFPRAVTELYSETESRNISELAGESHLLIRYPAVMYFFVAKQDTLLAERLEYGLKAAMAD
GSFDQLFYGFAPHKAALKQAQLHRRKLMTLDNPLLPESAMPAEVLKQQDEVIAHLEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33866; Mature: 33866

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLQRQFLAALLLSLSLPSTATEPLTVRYVDASVMKRNPNNAYFGQLLQLALEKSKAKY
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCC
GPYQLAPLDIDISQRRHFRELNNGVINVFWTMTNYRRELDALPVRVPLMKGVYGLRLLAA
CCEEEEEECCCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCHHHHHCHHHEEEEEC
NEHDLATLAGVQSLGDFAPFTFLQGRDWPDTQILRLNRLEVSTDVSEGDMYEFTRRHPGY
CCCCHHHHHHHHHHHCCCCCCEECCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHCCCCC
LFPRAVTELYSETESRNISELAGESHLLIRYPAVMYFFVAKQDTLLAERLEYGLKAAMAD
CCHHHHHHHHHHHHCCCHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
GSFDQLFYGFAPHKAALKQAQLHRRKLMTLDNPLLPESAMPAEVLKQQDEVIAHLEQ
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKLQRQFLAALLLSLSLPSTATEPLTVRYVDASVMKRNPNNAYFGQLLQLALEKSKAKY
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCC
GPYQLAPLDIDISQRRHFRELNNGVINVFWTMTNYRRELDALPVRVPLMKGVYGLRLLAA
CCEEEEEECCCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHCCCCCHHHHHCHHHEEEEEC
NEHDLATLAGVQSLGDFAPFTFLQGRDWPDTQILRLNRLEVSTDVSEGDMYEFTRRHPGY
CCCCHHHHHHHHHHHCCCCCCEECCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHCCCCC
LFPRAVTELYSETESRNISELAGESHLLIRYPAVMYFFVAKQDTLLAERLEYGLKAAMAD
CCHHHHHHHHHHHHCCCHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
GSFDQLFYGFAPHKAALKQAQLHRRKLMTLDNPLLPESAMPAEVLKQQDEVIAHLEQ
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA