The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776519

Identifier: 119776519

GI number: 119776519

Start: 4014228

End: 4014959

Strand: Direct

Name: 119776519

Synonym: Sama_3387

Alternate gene names: NA

Gene position: 4014228-4014959 (Clockwise)

Preceding gene: 119776518

Following gene: 119776520

Centisome position: 93.22

GC content: 55.33

Gene sequence:

>732_bases
ATGGGGCTGATTGTTAAGTTTTGCGTTGGAATACTGGCATCTATGCTGGTCTGGCTGCCAGCGCAGGCAGATGAAGCCCT
AAGCCAGAAGAGTATGACCCAGAACGCCGACGTCAATCTCGGGGCGCTCAGCACTGCCCTTAAGCCACAGGGAGCGGTGC
GCGGCGAGTTTGAACAGACCCGCACCCTCAAGGCGTTAAAGCGACCTCTGGTCAGCCGTGGCAGCTTTGTGTTCTCACCC
GACCAAGGCCTGATGTGGGCACAAAACCAGCCCTTTGAAAACTTACTGATTTTAAGCGAAACGCGCATGTTGAGCCGCGA
CAGCGAAGGCCTGTGGCAACAAACCGAGGTCAATGCCAAAGCGGGCCCAGCTACCTTAATGCCCATGCTGGTGAAGGCCA
TGATGGGCGGCGATATGGCTACGCTGGAGCGACATTTCTCACTGGCATTAAGCAGTCAGGAGAATCACTGGCAACTGACC
CTCGCCCCAAAAGATGAGGATATCAAGGCACTGTTTGCCGCTATCGAGCTTGAAGGCAGTTTTATCGGCGATGCAGGCAC
CACGCAGCAAACAGGCACCCAGACCAGAACAGACAAGGCCAGTACAAACAGGCTGAAACTTATCAGCCCCAATGGCGATG
TGAGCGATATCCGCTTCAGCAACCAGCAAAGCGGGCCGCTGTCGGAGCAAGAACTGCAGGCCTTTATCCCGCAAATTGAG
TCGGGGCAATAA

Upstream 100 bases:

>100_bases
ATTTCAGGCCAAAATTCGCCCGCTGCTGGGCGAAGCGGACGCCTGAGCTTTGGCTGAAAATAGCCGCAATGTTGAACCCC
TAGCATATAAAGAGGTAACT

Downstream 100 bases:

>100_bases
GTTAGATGGCGCTTGGGGGAAGCAAAATCACAGATAAGCCACAGACTGCAAGCCGCGCAGGGCTCAGGCTGGCCCTATGG
CTGCTCTTGCTCGCCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Exported Lipoprotein; Secreted Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MGLIVKFCVGILASMLVWLPAQADEALSQKSMTQNADVNLGALSTALKPQGAVRGEFEQTRTLKALKRPLVSRGSFVFSP
DQGLMWAQNQPFENLLILSETRMLSRDSEGLWQQTEVNAKAGPATLMPMLVKAMMGGDMATLERHFSLALSSQENHWQLT
LAPKDEDIKALFAAIELEGSFIGDAGTTQQTGTQTRTDKASTNRLKLISPNGDVSDIRFSNQQSGPLSEQELQAFIPQIE
SGQ

Sequences:

>Translated_243_residues
MGLIVKFCVGILASMLVWLPAQADEALSQKSMTQNADVNLGALSTALKPQGAVRGEFEQTRTLKALKRPLVSRGSFVFSP
DQGLMWAQNQPFENLLILSETRMLSRDSEGLWQQTEVNAKAGPATLMPMLVKAMMGGDMATLERHFSLALSSQENHWQLT
LAPKDEDIKALFAAIELEGSFIGDAGTTQQTGTQTRTDKASTNRLKLISPNGDVSDIRFSNQQSGPLSEQELQAFIPQIE
SGQ
>Mature_242_residues
GLIVKFCVGILASMLVWLPAQADEALSQKSMTQNADVNLGALSTALKPQGAVRGEFEQTRTLKALKRPLVSRGSFVFSPD
QGLMWAQNQPFENLLILSETRMLSRDSEGLWQQTEVNAKAGPATLMPMLVKAMMGGDMATLERHFSLALSSQENHWQLTL
APKDEDIKALFAAIELEGSFIGDAGTTQQTGTQTRTDKASTNRLKLISPNGDVSDIRFSNQQSGPLSEQELQAFIPQIES
GQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26511; Mature: 26379

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIVKFCVGILASMLVWLPAQADEALSQKSMTQNADVNLGALSTALKPQGAVRGEFEQT
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHH
RTLKALKRPLVSRGSFVFSPDQGLMWAQNQPFENLLILSETRMLSRDSEGLWQQTEVNAK
HHHHHHHHHHHHCCCEEECCCCCCEECCCCCHHHEEEEHHHHHHHCCCCCCCHHHCCCCC
AGPATLMPMLVKAMMGGDMATLERHFSLALSSQENHWQLTLAPKDEDIKALFAAIELEGS
CCCHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCEEEEECCCCHHHHHHHHHHHCCCC
FIGDAGTTQQTGTQTRTDKASTNRLKLISPNGDVSDIRFSNQQSGPLSEQELQAFIPQIE
EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHCCCC
SGQ
CCC
>Mature Secondary Structure 
GLIVKFCVGILASMLVWLPAQADEALSQKSMTQNADVNLGALSTALKPQGAVRGEFEQT
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHH
RTLKALKRPLVSRGSFVFSPDQGLMWAQNQPFENLLILSETRMLSRDSEGLWQQTEVNAK
HHHHHHHHHHHHCCCEEECCCCCCEECCCCCHHHEEEEHHHHHHHCCCCCCCHHHCCCCC
AGPATLMPMLVKAMMGGDMATLERHFSLALSSQENHWQLTLAPKDEDIKALFAAIELEGS
CCCHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCEEEEECCCCHHHHHHHHHHHCCCC
FIGDAGTTQQTGTQTRTDKASTNRLKLISPNGDVSDIRFSNQQSGPLSEQELQAFIPQIE
EECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHCCCC
SGQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA