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The map label for this gene is 119776503

Identifier: 119776503

GI number: 119776503

Start: 3997570

End: 3998202

Strand: Reverse

Name: 119776503

Synonym: Sama_3371

Alternate gene names: NA

Gene position: 3998202-3997570 (Counterclockwise)

Preceding gene: 119776504

Following gene: 119776502

Centisome position: 92.85

GC content: 46.45

Gene sequence:

>633_bases
ATGAAGCTGGATCTGAGCGAATTCAACGACATTGACTTTGAGAATATTGGTGGCTGGCCAGCCCAGGTAAAGGTCGTATT
TGCCATTCTCCTGGCTGTGATTGTGGGTGTTGCCAGTTATTTTCTGTTTATTTCTGATGCCATTGATGGCTTGAAGAGAG
AGCAGGATAAGGAAGTACAACTGAGGCAGGATTTTCAAAGTAAGTATCAACTGGCTGCCAACCTTAAGCTTTACCGAGAG
CAGTTGAAGGAGATGGAAGCCCAGTTTGCCGAGCTGCTGAAGATGTTGCCGTCAGAAAATGAAATGGATGGCTTACTTGA
TGATGTGACCTTTGTGGCCACCGACTCGGGACTCCATATTGAGAGTCTTGACTGGGAAGGCGCAGTCCAACGTGATTTTT
ATATCGAGTTCCCCATCAAAATGGTGGTGAGCGGCGATTATCATCAAATGGGCAGTATGGTCAGTGGGGTGGCTAAACTG
CCCCGTATTGTCAGCTTGCATGACTTTGTGATTAAACATCAGGATGGCGACATTCTGACCATGGATATTCTGGCCAAAAC
TTATCGCTTTAAAGAAGGGGCGGAATTGCCTCCAGAAAAAGACGCCAACAAAGCTAAGGGAGGCAAGAAATGA

Upstream 100 bases:

>100_bases
AGCTTAGAAAACTGCAGCGCTTCAGTCTTAAGGTAACCGTCGTTGATAAAGCCGCCCAAGAGCTGGAAAAAGCGGCCGCC
AGTAAACAAGGAGCGGCAAA

Downstream 100 bases:

>100_bases
AACGAGTCTTGCCGTTAGCCACTATCTTACTGTTTTTGACAGGCTGTATTGGCGATCGTAGCGATTTGGAACTATTTGTT
ACTACAACCAAAGCTCAGCA

Product: type IV pilus biogenesis protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilo Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKLDLSEFNDIDFENIGGWPAQVKVVFAILLAVIVGVASYFLFISDAIDGLKREQDKEVQLRQDFQSKYQLAANLKLYRE
QLKEMEAQFAELLKMLPSENEMDGLLDDVTFVATDSGLHIESLDWEGAVQRDFYIEFPIKMVVSGDYHQMGSMVSGVAKL
PRIVSLHDFVIKHQDGDILTMDILAKTYRFKEGAELPPEKDANKAKGGKK

Sequences:

>Translated_210_residues
MKLDLSEFNDIDFENIGGWPAQVKVVFAILLAVIVGVASYFLFISDAIDGLKREQDKEVQLRQDFQSKYQLAANLKLYRE
QLKEMEAQFAELLKMLPSENEMDGLLDDVTFVATDSGLHIESLDWEGAVQRDFYIEFPIKMVVSGDYHQMGSMVSGVAKL
PRIVSLHDFVIKHQDGDILTMDILAKTYRFKEGAELPPEKDANKAKGGKK
>Mature_210_residues
MKLDLSEFNDIDFENIGGWPAQVKVVFAILLAVIVGVASYFLFISDAIDGLKREQDKEVQLRQDFQSKYQLAANLKLYRE
QLKEMEAQFAELLKMLPSENEMDGLLDDVTFVATDSGLHIESLDWEGAVQRDFYIEFPIKMVVSGDYHQMGSMVSGVAKL
PRIVSLHDFVIKHQDGDILTMDILAKTYRFKEGAELPPEKDANKAKGGKK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23752; Mature: 23752

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDLSEFNDIDFENIGGWPAQVKVVFAILLAVIVGVASYFLFISDAIDGLKREQDKEVQ
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LRQDFQSKYQLAANLKLYREQLKEMEAQFAELLKMLPSENEMDGLLDDVTFVATDSGLHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEECCCCEE
ESLDWEGAVQRDFYIEFPIKMVVSGDYHQMGSMVSGVAKLPRIVSLHDFVIKHQDGDILT
ECCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEH
MDILAKTYRFKEGAELPPEKDANKAKGGKK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLDLSEFNDIDFENIGGWPAQVKVVFAILLAVIVGVASYFLFISDAIDGLKREQDKEVQ
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LRQDFQSKYQLAANLKLYREQLKEMEAQFAELLKMLPSENEMDGLLDDVTFVATDSGLHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEECCCCEE
ESLDWEGAVQRDFYIEFPIKMVVSGDYHQMGSMVSGVAKLPRIVSLHDFVIKHQDGDILT
ECCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEH
MDILAKTYRFKEGAELPPEKDANKAKGGKK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA