Click here to switch to the map view.

The map label for this gene is 119776450

Identifier: 119776450

GI number: 119776450

Start: 3947493

End: 3949019

Strand: Reverse

Name: 119776450

Synonym: Sama_3318

Alternate gene names: NA

Gene position: 3949019-3947493 (Counterclockwise)

Preceding gene: 119776452

Following gene: 119776449

Centisome position: 91.71

GC content: 58.61

Gene sequence:

>1527_bases
ATGGATGTGACTGACTTGCTGGAACTTATTCCTCTGATACTAACCCTGGTGCTGGCTTTGCTGCTCAGGCGCACACTTAT
TGCACTTGGCGCAGGCGTTGTGCTGGGCGCGTTGATTCTGAATGATTTTTCACCGGTAACCAGCCTTAAATACCTACTTA
ATACCCTGACGTCGCAGTTTTATCAGCAGAGCCAATGGCAGTGGTGGCATCTCAACGTGCTCTTTGCCATGTTGCTGCTG
GGGATAATGACCAGTTTGCTGGGCCGAAGCGGCGCCGTGGACGAGTTTGGCCACTGGCTGTCGGCACGGGTGCACAGTCG
CCGTCAGGCCAGAATGGGTATCATTGGCCTGGGTTTTCTGGTGTTTATCGACGGTATCTTCAGCTGTTTGGCCGTGGGCA
GTGTCGGGCGCCCTATTGCGCGCCAATATGGCATGTCACCGGCGCAGCTCTCCTACATGGTCGACACCACTGCGTCTCCC
TTATGCTCACTGGTGCCCGTGGCCAGCTGGGGCCCCTATGTGATGGCGCTTTTGGCCGCTATCAGCTTTTTGCCTGTCTC
GGCGCTGGACGCCTTTATCGCCATCGCCTCTGTTAATTTTTATGCGGTATCGGCCCTGGTACTGGTGGGGCTGGGCAGCC
TCTTTAACTGGGGGTGGTCTGAGCATGCCGTGGATGCTACAGAGCAGGCTGCTGGTGTTGATAATGCCCATCAACAAGCA
CAGCGGCCGAAAACCCCTTCTCCCTGGCCACTGATGCTGCCCCTGCTGGGGTTGCTGGTTGGGGCCTTGGCGTTCACCCT
GGCCTCAGGCGTCACACTGGCCAAGGAGCCGGGCATGGCTGCCTGGCTGGCAGCTGCGGATGTAGGTGCTGCCATGCGCA
ATGCCAGTTTGACGGCAGTGGTGCTGGCGGCCTTGATGGCGCTTTGGTGTGGGCGCGGGCTGCATCCACTGATGATAGAT
ATGTTGGTGGGGCTCAGGTCCATGGCGCTGGCGGTGGGCATTTTGCTGCTTACCTGGATGATAGGCGCTCTTATCAAAGA
TCTGGGCAGCGCCGCGCGCATTTCGGCCCTCGCCAATGATCTCTTGTCACCCAGTCTGCTGCTTGCCGGCATCTTTGCCC
TCTGCGCCATTATGGCCTTTGCCACCGGCACCAGTTGGGGCACCTTTGCCATCATGATCCCCCTCTGTGCTCAGGTGGCG
CAGGGCATGGCCCCTGAGCTTTTGTTACCTGCGCTGGCCGCGGTGATGGCAGGCTCTGTGTTTGGTGACCACTGCTCGCC
GATATCCGACACCAGTATTCTCAGTGCCACCGCCAGTGGTGCGGCCGTACATGAGCACGTGACCACCCAGTTGCCCTTTG
CCCTGATAGCGGCCATCGCGGCCTTGTGTGGCTTTCAGCTGCTTAATCTGGGGGCGTCCTGGTGGCTGGCCTGGGCAATG
ACGCTGATGGTGGGAATTGGGCTGCTGTTGCTTTGGCAGCTTAAGCAAAGCAGTGGAAATTTACTCAAGCAGGATGGACA
GGCTTAG

Upstream 100 bases:

>100_bases
TAAGCATTTTCACGCTTTCTGACATCCGTTTTCAGCCGGTTCTCCTCTTTGCCATATTCCCCGCGGCAGTTATGCTGACA
CTATCCGACAGACGCTGCGA

Downstream 100 bases:

>100_bases
CCAGCGCCGGGATGTGCGGCTACAATCCCGTCTTTTACGATGGAGAACCCCATGAGCATCATTCGAATGGATACAGGCGC
TCGCATGAGCAGCATTGTGA

Product: Na+/H+ antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MDVTDLLELIPLILTLVLALLLRRTLIALGAGVVLGALILNDFSPVTSLKYLLNTLTSQFYQQSQWQWWHLNVLFAMLLL
GIMTSLLGRSGAVDEFGHWLSARVHSRRQARMGIIGLGFLVFIDGIFSCLAVGSVGRPIARQYGMSPAQLSYMVDTTASP
LCSLVPVASWGPYVMALLAAISFLPVSALDAFIAIASVNFYAVSALVLVGLGSLFNWGWSEHAVDATEQAAGVDNAHQQA
QRPKTPSPWPLMLPLLGLLVGALAFTLASGVTLAKEPGMAAWLAAADVGAAMRNASLTAVVLAALMALWCGRGLHPLMID
MLVGLRSMALAVGILLLTWMIGALIKDLGSAARISALANDLLSPSLLLAGIFALCAIMAFATGTSWGTFAIMIPLCAQVA
QGMAPELLLPALAAVMAGSVFGDHCSPISDTSILSATASGAAVHEHVTTQLPFALIAAIAALCGFQLLNLGASWWLAWAM
TLMVGIGLLLLWQLKQSSGNLLKQDGQA

Sequences:

>Translated_508_residues
MDVTDLLELIPLILTLVLALLLRRTLIALGAGVVLGALILNDFSPVTSLKYLLNTLTSQFYQQSQWQWWHLNVLFAMLLL
GIMTSLLGRSGAVDEFGHWLSARVHSRRQARMGIIGLGFLVFIDGIFSCLAVGSVGRPIARQYGMSPAQLSYMVDTTASP
LCSLVPVASWGPYVMALLAAISFLPVSALDAFIAIASVNFYAVSALVLVGLGSLFNWGWSEHAVDATEQAAGVDNAHQQA
QRPKTPSPWPLMLPLLGLLVGALAFTLASGVTLAKEPGMAAWLAAADVGAAMRNASLTAVVLAALMALWCGRGLHPLMID
MLVGLRSMALAVGILLLTWMIGALIKDLGSAARISALANDLLSPSLLLAGIFALCAIMAFATGTSWGTFAIMIPLCAQVA
QGMAPELLLPALAAVMAGSVFGDHCSPISDTSILSATASGAAVHEHVTTQLPFALIAAIAALCGFQLLNLGASWWLAWAM
TLMVGIGLLLLWQLKQSSGNLLKQDGQA
>Mature_508_residues
MDVTDLLELIPLILTLVLALLLRRTLIALGAGVVLGALILNDFSPVTSLKYLLNTLTSQFYQQSQWQWWHLNVLFAMLLL
GIMTSLLGRSGAVDEFGHWLSARVHSRRQARMGIIGLGFLVFIDGIFSCLAVGSVGRPIARQYGMSPAQLSYMVDTTASP
LCSLVPVASWGPYVMALLAAISFLPVSALDAFIAIASVNFYAVSALVLVGLGSLFNWGWSEHAVDATEQAAGVDNAHQQA
QRPKTPSPWPLMLPLLGLLVGALAFTLASGVTLAKEPGMAAWLAAADVGAAMRNASLTAVVLAALMALWCGRGLHPLMID
MLVGLRSMALAVGILLLTWMIGALIKDLGSAARISALANDLLSPSLLLAGIFALCAIMAFATGTSWGTFAIMIPLCAQVA
QGMAPELLLPALAAVMAGSVFGDHCSPISDTSILSATASGAAVHEHVTTQLPFALIAAIAALCGFQLLNLGASWWLAWAM
TLMVGIGLLLLWQLKQSSGNLLKQDGQA

Specific function: Unknown

COG id: COG1757

COG function: function code C; Na+/H+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 53478; Mature: 53478

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]