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The map label for this gene is yoaB [C]

Identifier: 119776449

GI number: 119776449

Start: 3947088

End: 3947441

Strand: Reverse

Name: yoaB [C]

Synonym: Sama_3317

Alternate gene names: 119776449

Gene position: 3947441-3947088 (Counterclockwise)

Preceding gene: 119776450

Following gene: 119776447

Centisome position: 91.67

GC content: 57.06

Gene sequence:

>354_bases
ATGAGCATCATTCGAATGGATACAGGCGCTCGCATGAGCAGCATTGTGATACATCAGGGCACAGTGTACCTCTGTGGTCA
GGTGGCCAAAGACAAGCTGACCGACATCCGCACCCAGACCCAAACCATGCTGGAAGAAGTGGACACCCTGCTGAGCCAGG
CGGGCAGCAGCCGTGAGCATCTGCTGAGCTGCACCATCTATCTGAAAAATATGGCCGACTACGATGCCATGAATGAAGTG
TGGGATGCCTGGGTACCCAAAGGGCATGCCCCGGCAAGGGCCTGTGTGGAAGCCGCCATCGCCGAGCCCGAGTATCTGGT
AGAAATTTCTGTGGTCGCGGCCCAGAAGGCCTGA

Upstream 100 bases:

>100_bases
GCTTAAGCAAAGCAGTGGAAATTTACTCAAGCAGGATGGACAGGCTTAGCCAGCGCCGGGATGTGCGGCTACAATCCCGT
CTTTTACGATGGAGAACCCC

Downstream 100 bases:

>100_bases
AGTTAACCTATCAGTACCCGACCGAACTCGGCGCCCTCGATATCCGGGGTGATGGCGATGATGCGGTCGAGTCTGATGGC
CCTGTGGGAAGTGGCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSIIRMDTGARMSSIVIHQGTVYLCGQVAKDKLTDIRTQTQTMLEEVDTLLSQAGSSREHLLSCTIYLKNMADYDAMNEV
WDAWVPKGHAPARACVEAAIAEPEYLVEISVVAAQKA

Sequences:

>Translated_117_residues
MSIIRMDTGARMSSIVIHQGTVYLCGQVAKDKLTDIRTQTQTMLEEVDTLLSQAGSSREHLLSCTIYLKNMADYDAMNEV
WDAWVPKGHAPARACVEAAIAEPEYLVEISVVAAQKA
>Mature_116_residues
SIIRMDTGARMSSIVIHQGTVYLCGQVAKDKLTDIRTQTQTMLEEVDTLLSQAGSSREHLLSCTIYLKNMADYDAMNEVW
DAWVPKGHAPARACVEAAIAEPEYLVEISVVAAQKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=43.859649122807, Blast_Score=105, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12872; Mature: 12741

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIRMDTGARMSSIVIHQGTVYLCGQVAKDKLTDIRTQTQTMLEEVDTLLSQAGSSREH
CCEEECCCCCCHHEEEEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLSCTIYLKNMADYDAMNEVWDAWVPKGHAPARACVEAAIAEPEYLVEISVVAAQKA
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
SIIRMDTGARMSSIVIHQGTVYLCGQVAKDKLTDIRTQTQTMLEEVDTLLSQAGSSREH
CEEECCCCCCHHEEEEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLSCTIYLKNMADYDAMNEVWDAWVPKGHAPARACVEAAIAEPEYLVEISVVAAQKA
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA