| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is tatA
Identifier: 119776337
GI number: 119776337
Start: 3796274
End: 3796507
Strand: Direct
Name: tatA
Synonym: Sama_3205
Alternate gene names: 119776337
Gene position: 3796274-3796507 (Clockwise)
Preceding gene: 119776336
Following gene: 119776338
Centisome position: 88.16
GC content: 47.44
Gene sequence:
>234_bases ATGGGTGGTATCAGTATTTGGCAATTGCTCATCATCGCACTTATCGTGGTTTTGCTGTTTGGCACCAAGAAGTTGCGTTC TCTGGGTGGCGACCTCGGTGGCGCTATCAAGGGATTCAAAAACGCCATGTCTGATGAAGAAAAAAAGGCATTGGAAGACA AAGAAGCCGCTGCTCAAACCACACAACAGGCAACTGAAAAGAAGCCTGAGGCCGACAAAAAAGAACAGGCGTAA
Upstream 100 bases:
>100_bases CCGGATGGCGATCCAGACCAAAGAATCGCAAATTTTAGCTAGCACTAAATAATCACAGGTTCATAATAGAATCACTTAAT TTTGTAGAGAGGAATTCTTC
Downstream 100 bases:
>100_bases TTCCTTATGTTTGACGGTATCGGCTTTATGGAGCTTCTGCTCATCGCCATCATAGGTTTGGTGGTGCTTGGGCCGGAGAG ATTACCTGTTGCAGTGCGTA
Product: Sec-independent protein translocase protein TatA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQTTQQATEKKPEADKKEQA
Sequences:
>Translated_77_residues MGGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQTTQQATEKKPEADKKEQA >Mature_76_residues GGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQTTQQATEKKPEADKKEQA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=88, Percent_Identity=54.5454545454545, Blast_Score=86, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_SHEAM (A1SAK1)
Other databases:
- EMBL: CP000507 - RefSeq: YP_929077.1 - STRING: A1SAK1 - GeneID: 4605452 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_3205 - NMPDR: fig|326297.7.peg.3017 - eggNOG: NOG84601 - HOGENOM: HBG751935 - OMA: TINHNAD - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8272; Mature: 8141
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16992190)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQT CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH TQQATEKKPEADKKEQA HHHHHHCCCCCCCCCCH >Mature Secondary Structure GGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQT CHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH TQQATEKKPEADKKEQA HHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA