| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is accC [H]
Identifier: 119776328
GI number: 119776328
Start: 3787677
End: 3789041
Strand: Direct
Name: accC [H]
Synonym: Sama_3196
Alternate gene names: 119776328
Gene position: 3787677-3789041 (Clockwise)
Preceding gene: 119776327
Following gene: 119776332
Centisome position: 87.96
GC content: 60.0
Gene sequence:
>1365_bases ATGCCGACTGAGGCCCGCTTTAAACGGGTACTGGTGGCCAATCGCGGTGAAATCGCGGTACGCATTATCCGCGCCTGCCA TCAACTGGGGCTGGAAACCGTTGCCATCTATTCCAGCGCCGACAAGGGCGCGCTGCACACCCTGCTGGCAACCCACTGCC TGTGCATAGGCCCAGCGGCGGCCAAAGACAGCTACCTCAATATCAATGCCATATTGGAAGCCGCCAAACTCACGGCCGCC GATGCCATACACCCGGGTTATGGCTTTTTGGCCGAGCGGGCCGGGTTTGCCCGGGCAGTGACAGAGGCGGGCCTGGTGTT TCTGGGGCCTGATGCCGATACCATAGCCACCATGGGCGATAAGGTCAGCGCCATCAAATCCATCAAGGCCGTGGGCATTC CTACGCTGCCGGGCTCAGATGGGGCGCTGAATGATGACATGAACGCTGTTGAGGCCCTCGCCACCGACATAGGTTATCCG GTGCTTATCAAGGCCAGTGCCGGCGGAGGTGGCCGGGGGATGCGCCGGGTCGACTCGGCAGACGAGCTGGCATCAGCCAT TGCCCTTACCCGCAGCGAAGCCCTGGCGGCCTTTGGCGACAACACCGTCTATCTGGAGAAATTCCTCACGCATCCACGCC ATATCGAGTTTCAGATGCTGGCCGATGGCGAAGCTGCGCTGTGTCTCGGTGAGCGGGACTGCTCCGCCCAGCGCCGTCAT CAAAAGCTGATTGAAGAGGCGCCGGCACTCGGAATTGCCCGAGAGAAAATACGGGAGATGGCCGATATCTGTGAGGCCGC CTGTCGGCGTCTCGGGTACCGAGGAGTGGGCACCTTTGAGTTTCTCTATCAGGACGGCGCCTTTTTCTTTATCGAAATGA ACACCCGTATTCAGGTTGAGCACACAGTCACCGAGATGGTGACCGGGCTGGATCTCATTGCCTGGCAGCTGAAAGTGGCC CTGGGACACCCTCTGCCACCAAGGCCTCAGGTACAGGGTCATGCAATCGAGTGTCGCATCAATGCCGAAGCCCCCCAAAG CCAGTTGCCTTCACCTGGGGTAATAACCCAGCTCAGGGTGCCAGGCGGCCCAGGGGTTCGGTGGGACTCCTATCTCTTCC CCGGGGCAATGGTACCTGCCTTTTACGACTCGCTGATTGGCAAACTCATCTGCCACGGCGTCACCCGCGAAGAGGCCACG GCGCGCCTGCGGCAGGCACTGACAGAGCTTGAAATTCAAGGGATCGCCATCAATAAGTCCCTGCACCTGCAACTCATTGC ATGTGACGCATTCCAGCCCTGGCAGCGTGACATTCATTTTGTTGATGCACTCTCAGCGCCAGGTGTCGGGCAGGCGCACC TGTGA
Upstream 100 bases:
>100_bases ATGAACCAAATAGCCGCCGACCGCGCCGGGACAGTGAAAGCGATTCTGGTAGAAAACGGCACCGCTGTGGAGTTTGACCA ACCCCTGTTTGTGATTGGTG
Downstream 100 bases:
>100_bases CCACAGCTGCTCACTGAGTACATCGCCCCTGTGCCATTCTCCCTGCTCAACCCATTGCACCAGGGCGTCGCCCACGGCGG GATAACGCACCGGCTCAGGG
Product: acetyl-CoA carboxylase, biotin carboxylase
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MPTEARFKRVLVANRGEIAVRIIRACHQLGLETVAIYSSADKGALHTLLATHCLCIGPAAAKDSYLNINAILEAAKLTAA DAIHPGYGFLAERAGFARAVTEAGLVFLGPDADTIATMGDKVSAIKSIKAVGIPTLPGSDGALNDDMNAVEALATDIGYP VLIKASAGGGGRGMRRVDSADELASAIALTRSEALAAFGDNTVYLEKFLTHPRHIEFQMLADGEAALCLGERDCSAQRRH QKLIEEAPALGIAREKIREMADICEAACRRLGYRGVGTFEFLYQDGAFFFIEMNTRIQVEHTVTEMVTGLDLIAWQLKVA LGHPLPPRPQVQGHAIECRINAEAPQSQLPSPGVITQLRVPGGPGVRWDSYLFPGAMVPAFYDSLIGKLICHGVTREEAT ARLRQALTELEIQGIAINKSLHLQLIACDAFQPWQRDIHFVDALSAPGVGQAHL
Sequences:
>Translated_454_residues MPTEARFKRVLVANRGEIAVRIIRACHQLGLETVAIYSSADKGALHTLLATHCLCIGPAAAKDSYLNINAILEAAKLTAA DAIHPGYGFLAERAGFARAVTEAGLVFLGPDADTIATMGDKVSAIKSIKAVGIPTLPGSDGALNDDMNAVEALATDIGYP VLIKASAGGGGRGMRRVDSADELASAIALTRSEALAAFGDNTVYLEKFLTHPRHIEFQMLADGEAALCLGERDCSAQRRH QKLIEEAPALGIAREKIREMADICEAACRRLGYRGVGTFEFLYQDGAFFFIEMNTRIQVEHTVTEMVTGLDLIAWQLKVA LGHPLPPRPQVQGHAIECRINAEAPQSQLPSPGVITQLRVPGGPGVRWDSYLFPGAMVPAFYDSLIGKLICHGVTREEAT ARLRQALTELEIQGIAINKSLHLQLIACDAFQPWQRDIHFVDALSAPGVGQAHL >Mature_453_residues PTEARFKRVLVANRGEIAVRIIRACHQLGLETVAIYSSADKGALHTLLATHCLCIGPAAAKDSYLNINAILEAAKLTAAD AIHPGYGFLAERAGFARAVTEAGLVFLGPDADTIATMGDKVSAIKSIKAVGIPTLPGSDGALNDDMNAVEALATDIGYPV LIKASAGGGGRGMRRVDSADELASAIALTRSEALAAFGDNTVYLEKFLTHPRHIEFQMLADGEAALCLGERDCSAQRRHQ KLIEEAPALGIAREKIREMADICEAACRRLGYRGVGTFEFLYQDGAFFFIEMNTRIQVEHTVTEMVTGLDLIAWQLKVAL GHPLPPRPQVQGHAIECRINAEAPQSQLPSPGVITQLRVPGGPGVRWDSYLFPGAMVPAFYDSLIGKLICHGVTREEATA RLRQALTELEIQGIAINKSLHLQLIACDAFQPWQRDIHFVDALSAPGVGQAHL
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI65506442, Length=438, Percent_Identity=45.4337899543379, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI295821183, Length=438, Percent_Identity=45.4337899543379, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI189095269, Length=433, Percent_Identity=45.4965357967667, Blast_Score=359, Evalue=3e-99, Organism=Homo sapiens, GI116805327, Length=440, Percent_Identity=41.1363636363636, Blast_Score=335, Evalue=4e-92, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=42.2818791946309, Blast_Score=318, Evalue=8e-87, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=42.2818791946309, Blast_Score=318, Evalue=8e-87, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=42.2818791946309, Blast_Score=318, Evalue=8e-87, Organism=Homo sapiens, GI38679977, Length=509, Percent_Identity=31.434184675835, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI38679967, Length=509, Percent_Identity=31.434184675835, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI38679960, Length=509, Percent_Identity=31.434184675835, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI38679971, Length=509, Percent_Identity=31.434184675835, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI38679974, Length=509, Percent_Identity=31.434184675835, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI134142062, Length=512, Percent_Identity=31.25, Blast_Score=211, Evalue=1e-54, Organism=Escherichia coli, GI1789654, Length=438, Percent_Identity=56.62100456621, Blast_Score=495, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17567343, Length=438, Percent_Identity=42.2374429223744, Blast_Score=331, Evalue=4e-91, Organism=Caenorhabditis elegans, GI17562816, Length=453, Percent_Identity=43.2671081677704, Blast_Score=316, Evalue=1e-86, Organism=Caenorhabditis elegans, GI71987519, Length=431, Percent_Identity=41.0672853828306, Blast_Score=311, Evalue=5e-85, Organism=Caenorhabditis elegans, GI133931226, Length=495, Percent_Identity=28.2828282828283, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71997168, Length=411, Percent_Identity=30.4136253041363, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI71997163, Length=411, Percent_Identity=30.4136253041363, Blast_Score=182, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6319685, Length=433, Percent_Identity=39.7228637413395, Blast_Score=320, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6319695, Length=450, Percent_Identity=40.8888888888889, Blast_Score=299, Evalue=7e-82, Organism=Saccharomyces cerevisiae, GI6321376, Length=439, Percent_Identity=41.9134396355353, Blast_Score=289, Evalue=6e-79, Organism=Saccharomyces cerevisiae, GI6323863, Length=412, Percent_Identity=34.7087378640777, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6324343, Length=479, Percent_Identity=29.4363256784969, Blast_Score=196, Evalue=5e-51, Organism=Drosophila melanogaster, GI24651757, Length=442, Percent_Identity=41.1764705882353, Blast_Score=332, Evalue=2e-91, Organism=Drosophila melanogaster, GI281363050, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI24652224, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI24652222, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI24652220, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI24652218, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=5e-87, Organism=Drosophila melanogaster, GI24652212, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=6e-87, Organism=Drosophila melanogaster, GI24652210, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=6e-87, Organism=Drosophila melanogaster, GI24652214, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=6e-87, Organism=Drosophila melanogaster, GI19921944, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=6e-87, Organism=Drosophila melanogaster, GI24652216, Length=446, Percent_Identity=41.2556053811659, Blast_Score=318, Evalue=6e-87, Organism=Drosophila melanogaster, GI24651759, Length=406, Percent_Identity=40.64039408867, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI161076409, Length=503, Percent_Identity=31.013916500994, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI161076407, Length=503, Percent_Identity=31.013916500994, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24586460, Length=503, Percent_Identity=31.013916500994, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24586458, Length=503, Percent_Identity=31.013916500994, Blast_Score=209, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 48798; Mature: 48667
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTEARFKRVLVANRGEIAVRIIRACHQLGLETVAIYSSADKGALHTLLATHCLCIGPAA CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC AKDSYLNINAILEAAKLTAADAIHPGYGFLAERAGFARAVTEAGLVFLGPDADTIATMGD CCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCCH KVSAIKSIKAVGIPTLPGSDGALNDDMNAVEALATDIGYPVLIKASAGGGGRGMRRVDSA HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCH DELASAIALTRSEALAAFGDNTVYLEKFLTHPRHIEFQMLADGEAALCLGERDCSAQRRH HHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHH QKLIEEAPALGIAREKIREMADICEAACRRLGYRGVGTFEFLYQDGAFFFIEMNTRIQVE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEH HTVTEMVTGLDLIAWQLKVALGHPLPPRPQVQGHAIECRINAEAPQSQLPSPGVITQLRV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCEEEEEC PGGPGVRWDSYLFPGAMVPAFYDSLIGKLICHGVTREEATARLRQALTELEIQGIAINKS CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEECCC LHLQLIACDAFQPWQRDIHFVDALSAPGVGQAHL EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PTEARFKRVLVANRGEIAVRIIRACHQLGLETVAIYSSADKGALHTLLATHCLCIGPAA CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC AKDSYLNINAILEAAKLTAADAIHPGYGFLAERAGFARAVTEAGLVFLGPDADTIATMGD CCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCCH KVSAIKSIKAVGIPTLPGSDGALNDDMNAVEALATDIGYPVLIKASAGGGGRGMRRVDSA HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCH DELASAIALTRSEALAAFGDNTVYLEKFLTHPRHIEFQMLADGEAALCLGERDCSAQRRH HHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHH QKLIEEAPALGIAREKIREMADICEAACRRLGYRGVGTFEFLYQDGAFFFIEMNTRIQVE HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEH HTVTEMVTGLDLIAWQLKVALGHPLPPRPQVQGHAIECRINAEAPQSQLPSPGVITQLRV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCEEEEEC PGGPGVRWDSYLFPGAMVPAFYDSLIGKLICHGVTREEATARLRQALTELEIQGIAINKS CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEECCC LHLQLIACDAFQPWQRDIHFVDALSAPGVGQAHL EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]