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The map label for this gene is psrC [H]

Identifier: 119776307

GI number: 119776307

Start: 3763536

End: 3764522

Strand: Reverse

Name: psrC [H]

Synonym: Sama_3175

Alternate gene names: 119776307

Gene position: 3764522-3763536 (Counterclockwise)

Preceding gene: 119776308

Following gene: 119776306

Centisome position: 87.42

GC content: 57.45

Gene sequence:

>987_bases
ATGAACAATATCTGGGGTGATATGAGTCAGTACGACGGCATTACCTGGCATTGGGTGATTGCGGTGTACCTCTTTATGGC
CGGTTTGTCGGCGGGCAGCTTGTTGATGGGGATTGGTCTGCGCTGGTATCGTGGCCAAACTCAGGGCAGTAGCCAGAGCC
GTGCTGAAAGCGCCGTGCTCAAAGCCGCCGCCTTGATTGCGCCCATCGCCATTTGTCTTGGGATGCTGTGTCTGGTGTTT
GACCTGACCAAACCGTTCCACTTCTGGCTGATTTTGATTAACTACAACTTAAGCTCGGTGATGTCGATTGGGGTGATAGC
GCTCCTCGCATACATTCCGCTGACCTTTGTCTATGCGCTGGTGGTGCTCAAAGATGAGCTGCCAAAGTGTGGTTTGGGCT
TCCTGGGCGGCCTCGCCGATAGCCTCGGCAAGCTTCGCGGCATGCTGGAAGGAGCGCTCTTTGTGCTGTCGCTGGTGGTG
GGGGCCTATACAGGTTTCCTGATTTCCGCCATGAACGCCTATCCCATGCTCAATACCGCGGTGCTGCCTGCGCTGTTTTT
GGTATCGGGTTTATCGGCGGGTGCGGCGGCCAACAGCCTGCTGGCGGTGACGATGTTTGGTGGCGATAAGCATAGCCCCC
AGGCTTCCGGCTCCCGCTCTGGTGGCTTCTCTGGTGACCTTGAGCGTCAGCACGCCTTCGAGCTGCCGGTGATGGGCATG
GAAATGCTGTTCCTGTTTATGCTGTTTACCGCGCTGTATTTCAAAGGTGGCGCGGCGGCAGCGGCGCTGGCATCGATCTC
TGGCGGACTGTGGGCAGCTGTATTCTGGATTGGGGTAGTGGCTATCGGCTTTGGGGTGCCACTGATGATGCGCCTCAGTG
GTAAACACGGCCGCAGCGCCATGGTCACAGCGGCCTGCGCGAGCCTGATTGGGGTGCTGGCACTGCGGCATTTTATCCTT
TACGCCGGTCAATCTTATCTGTCTTGA

Upstream 100 bases:

>100_bases
CCAAACTGCTTGCCACCAAGGTGAGTTATCAGGACAAGACACATCTTGGCACCAAACCCAGGCTGTACCGTATTCCAGCC
AAGCGTGGAGGTATCTGATT

Downstream 100 bases:

>100_bases
TTACTCTAATCGATTAGCCCAAAAAGCCCGCATTTGCGGGCTTTTTTTTAGATGATATTTCAGCGCGTTGTTCCACGCTG
AACTAAGCTTTTAAAAGATT

Product: polysulfide reductase subunit C

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Sulfur reductase chain C [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNNIWGDMSQYDGITWHWVIAVYLFMAGLSAGSLLMGIGLRWYRGQTQGSSQSRAESAVLKAAALIAPIAICLGMLCLVF
DLTKPFHFWLILINYNLSSVMSIGVIALLAYIPLTFVYALVVLKDELPKCGLGFLGGLADSLGKLRGMLEGALFVLSLVV
GAYTGFLISAMNAYPMLNTAVLPALFLVSGLSAGAAANSLLAVTMFGGDKHSPQASGSRSGGFSGDLERQHAFELPVMGM
EMLFLFMLFTALYFKGGAAAAALASISGGLWAAVFWIGVVAIGFGVPLMMRLSGKHGRSAMVTAACASLIGVLALRHFIL
YAGQSYLS

Sequences:

>Translated_328_residues
MNNIWGDMSQYDGITWHWVIAVYLFMAGLSAGSLLMGIGLRWYRGQTQGSSQSRAESAVLKAAALIAPIAICLGMLCLVF
DLTKPFHFWLILINYNLSSVMSIGVIALLAYIPLTFVYALVVLKDELPKCGLGFLGGLADSLGKLRGMLEGALFVLSLVV
GAYTGFLISAMNAYPMLNTAVLPALFLVSGLSAGAAANSLLAVTMFGGDKHSPQASGSRSGGFSGDLERQHAFELPVMGM
EMLFLFMLFTALYFKGGAAAAALASISGGLWAAVFWIGVVAIGFGVPLMMRLSGKHGRSAMVTAACASLIGVLALRHFIL
YAGQSYLS
>Mature_328_residues
MNNIWGDMSQYDGITWHWVIAVYLFMAGLSAGSLLMGIGLRWYRGQTQGSSQSRAESAVLKAAALIAPIAICLGMLCLVF
DLTKPFHFWLILINYNLSSVMSIGVIALLAYIPLTFVYALVVLKDELPKCGLGFLGGLADSLGKLRGMLEGALFVLSLVV
GAYTGFLISAMNAYPMLNTAVLPALFLVSGLSAGAAANSLLAVTMFGGDKHSPQASGSRSGGFSGDLERQHAFELPVMGM
EMLFLFMLFTALYFKGGAAAAALASISGGLWAAVFWIGVVAIGFGVPLMMRLSGKHGRSAMVTAACASLIGVLALRHFIL
YAGQSYLS

Specific function: Component of the phosphorylative electron transport system with polysulfide as the terminal acceptor [H]

COG id: COG3301

COG function: function code P; Formate-dependent nitrite reductase, membrane component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

Organism=Escherichia coli, GI1790509, Length=326, Percent_Identity=37.1165644171779, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 34692; Mature: 34692

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIWGDMSQYDGITWHWVIAVYLFMAGLSAGSLLMGIGLRWYRGQTQGSSQSRAESAVL
CCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHH
KAAALIAPIAICLGMLCLVFDLTKPFHFWLILINYNLSSVMSIGVIALLAYIPLTFVYAL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
VVLKDELPKCGLGFLGGLADSLGKLRGMLEGALFVLSLVVGAYTGFLISAMNAYPMLNTA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VLPALFLVSGLSAGAAANSLLAVTMFGGDKHSPQASGSRSGGFSGDLERQHAFELPVMGM
HHHHHHHHHCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH
EMLFLFMLFTALYFKGGAAAAALASISGGLWAAVFWIGVVAIGFGVPLMMRLSGKHGRSA
HHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHH
MVTAACASLIGVLALRHFILYAGQSYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNIWGDMSQYDGITWHWVIAVYLFMAGLSAGSLLMGIGLRWYRGQTQGSSQSRAESAVL
CCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHH
KAAALIAPIAICLGMLCLVFDLTKPFHFWLILINYNLSSVMSIGVIALLAYIPLTFVYAL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
VVLKDELPKCGLGFLGGLADSLGKLRGMLEGALFVLSLVVGAYTGFLISAMNAYPMLNTA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VLPALFLVSGLSAGAAANSLLAVTMFGGDKHSPQASGSRSGGFSGDLERQHAFELPVMGM
HHHHHHHHHCCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH
EMLFLFMLFTALYFKGGAAAAALASISGGLWAAVFWIGVVAIGFGVPLMMRLSGKHGRSA
HHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHH
MVTAACASLIGVLALRHFILYAGQSYLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597189; 14500908 [H]