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The map label for this gene is 119776306

Identifier: 119776306

GI number: 119776306

Start: 3762204

End: 3763397

Strand: Reverse

Name: 119776306

Synonym: Sama_3174

Alternate gene names: NA

Gene position: 3763397-3762204 (Counterclockwise)

Preceding gene: 119776307

Following gene: 119776303

Centisome position: 87.4

GC content: 54.1

Gene sequence:

>1194_bases
ATGAAGATGAAACTCATCGCCGCCTCGTTGGGGCTGATACTCTGTCCGTACAGCTTTGCTGCCCAGGATGTGTTTGAAGC
CAGAAGTGACGCCCTGGGCGGCACGGGTGTGGCGTCGGCCAGTTTGGAGGCGGCTCCCTGGATGAACCCGGCGCTCCTGT
CTTTACCCGGTTATACCGAAGGAGACTTTGGACTGCTTATTCCTGTGCTTGGTGCAGAGGTCTCTGATCAGGACAATATG
ACCGACAAGTTCGACACCCTCGAAGATAATTACGACGGCCTGGACGGCGCAATCGACAGAGGGGATGTGGATGCCATCGA
TAGCTTTCGTCAGGCCTTGCTTGGTGATTTACGTGGGCTGGATGGCAATACCGCGTACGCCTCTGCAGGCATAGGGTTCA
GCTTTGCCATGCCCACCAAAGGAATCAGCTGGGGTATTTATTACCGCAGTTACCTCGATGGTATTGCCTTGGCGGACATC
AGCGATGCGGACATCCAGCTTCTGGAAGCCCTCGACCCACAGGCTCCGCCGGCGCTGGACGATTTAACCTCCCAGGGGCG
GGTGATTGCCGGCGCTTCATCTGAGTTGGCGCTTTCGGTCAGCTTGCCGTTATCCATAGTCAATATGCCCGTTACCGTGG
GGTTGACTCCCAAACTGCAGCGGCTCGACAGCTTTAATTATGCGGTCAGTGCCAACAATTTCGATGCCGGTGATTTCGAC
AGCGACGATTATCGCAACGATGATACGGGCTTTAACCTGGATGCCGGTATTGCCATGATGCCCATGGACGGATTGACACT
GGGGCTGGTGGGCCGGAATTTGATTGAGCGTGAGCTGGATACCGTAGAGTCAGAAGGGGTCAGTGCCATTTATCGGGCAG
GTCCCATGGTCACTTTTGGCGCCGCGTTTCAAAGTGGCAATTGGCAGCTGAGTACTGACCTGGATTTAATGGATAACGAG
AAGTTTGTTGGTCTTGAGGGTACCAAATATTGGCGCTTGGGAGCCGAATGGCATGCGCTGGATTGGTTGTCACTGCGGTT
GGGTTACCGACAGGATCTCAATGACATGACCGCCGATATCTATTCTTTCGGTACCGGTTTTCAGATAGGTTCAGGATTCA
AGCTGGATTTGGCCGGTATGTGGGGAGATAAAGACACAGTGGGTGCCGTGCTGCAAAGCTCCTATCACTTTTAA

Upstream 100 bases:

>100_bases
GGCTTTTTTTTAGATGATATTTCAGCGCGTTGTTCCACGCTGAACTAAGCTTTTAAAAGATTGTTGCCGGGTCAAAAACA
GAAAAATCAGGGAGAACAGG

Downstream 100 bases:

>100_bases
GCCTGCAGCACCTTTGCCGCATTAACTTGCCAGCAAAACCACCAGTGACTTGGCCGCCAGCACCAAAGCACTGATTGAGC
AAAGAACCAGAGTCGCGACT

Product: putative outer membrane or exported

Products: NA

Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Outer Membrane Or Exported; Conjugative Transfer Protein; TraF-Related Protein; Ribonuclease PH; IncI1 Plasmid Conjugative Transfer Protein TraF

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKMKLIAASLGLILCPYSFAAQDVFEARSDALGGTGVASASLEAAPWMNPALLSLPGYTEGDFGLLIPVLGAEVSDQDNM
TDKFDTLEDNYDGLDGAIDRGDVDAIDSFRQALLGDLRGLDGNTAYASAGIGFSFAMPTKGISWGIYYRSYLDGIALADI
SDADIQLLEALDPQAPPALDDLTSQGRVIAGASSELALSVSLPLSIVNMPVTVGLTPKLQRLDSFNYAVSANNFDAGDFD
SDDYRNDDTGFNLDAGIAMMPMDGLTLGLVGRNLIERELDTVESEGVSAIYRAGPMVTFGAAFQSGNWQLSTDLDLMDNE
KFVGLEGTKYWRLGAEWHALDWLSLRLGYRQDLNDMTADIYSFGTGFQIGSGFKLDLAGMWGDKDTVGAVLQSSYHF

Sequences:

>Translated_397_residues
MKMKLIAASLGLILCPYSFAAQDVFEARSDALGGTGVASASLEAAPWMNPALLSLPGYTEGDFGLLIPVLGAEVSDQDNM
TDKFDTLEDNYDGLDGAIDRGDVDAIDSFRQALLGDLRGLDGNTAYASAGIGFSFAMPTKGISWGIYYRSYLDGIALADI
SDADIQLLEALDPQAPPALDDLTSQGRVIAGASSELALSVSLPLSIVNMPVTVGLTPKLQRLDSFNYAVSANNFDAGDFD
SDDYRNDDTGFNLDAGIAMMPMDGLTLGLVGRNLIERELDTVESEGVSAIYRAGPMVTFGAAFQSGNWQLSTDLDLMDNE
KFVGLEGTKYWRLGAEWHALDWLSLRLGYRQDLNDMTADIYSFGTGFQIGSGFKLDLAGMWGDKDTVGAVLQSSYHF
>Mature_397_residues
MKMKLIAASLGLILCPYSFAAQDVFEARSDALGGTGVASASLEAAPWMNPALLSLPGYTEGDFGLLIPVLGAEVSDQDNM
TDKFDTLEDNYDGLDGAIDRGDVDAIDSFRQALLGDLRGLDGNTAYASAGIGFSFAMPTKGISWGIYYRSYLDGIALADI
SDADIQLLEALDPQAPPALDDLTSQGRVIAGASSELALSVSLPLSIVNMPVTVGLTPKLQRLDSFNYAVSANNFDAGDFD
SDDYRNDDTGFNLDAGIAMMPMDGLTLGLVGRNLIERELDTVESEGVSAIYRAGPMVTFGAAFQSGNWQLSTDLDLMDNE
KFVGLEGTKYWRLGAEWHALDWLSLRLGYRQDLNDMTADIYSFGTGFQIGSGFKLDLAGMWGDKDTVGAVLQSSYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42595; Mature: 42595

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKLIAASLGLILCPYSFAAQDVFEARSDALGGTGVASASLEAAPWMNPALLSLPGYTE
CCEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
GDFGLLIPVLGAEVSDQDNMTDKFDTLEDNYDGLDGAIDRGDVDAIDSFRQALLGDLRGL
CCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
DGNTAYASAGIGFSFAMPTKGISWGIYYRSYLDGIALADISDADIQLLEALDPQAPPALD
CCCCEEEECCCCEEEECCCCCCEEHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCHH
DLTSQGRVIAGASSELALSVSLPLSIVNMPVTVGLTPKLQRLDSFNYAVSANNFDAGDFD
HHCCCCEEEEECCCCEEEEEECCEEEEECCEEECCCHHHHHHCCCCEEEECCCCCCCCCC
SDDYRNDDTGFNLDAGIAMMPMDGLTLGLVGRNLIERELDTVESEGVSAIYRAGPMVTFG
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEE
AAFQSGNWQLSTDLDLMDNEKFVGLEGTKYWRLGAEWHALDWLSLRLGYRQDLNDMTADI
EEECCCCEEEEECCEECCCCEEEECCCCEEEEECCCEEHHHHHHHHCCCHHCHHHHHHHH
YSFGTGFQIGSGFKLDLAGMWGDKDTVGAVLQSSYHF
HHCCCCCEECCCCEEEEEECCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKMKLIAASLGLILCPYSFAAQDVFEARSDALGGTGVASASLEAAPWMNPALLSLPGYTE
CCEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
GDFGLLIPVLGAEVSDQDNMTDKFDTLEDNYDGLDGAIDRGDVDAIDSFRQALLGDLRGL
CCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
DGNTAYASAGIGFSFAMPTKGISWGIYYRSYLDGIALADISDADIQLLEALDPQAPPALD
CCCCEEEECCCCEEEECCCCCCEEHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCHH
DLTSQGRVIAGASSELALSVSLPLSIVNMPVTVGLTPKLQRLDSFNYAVSANNFDAGDFD
HHCCCCEEEEECCCCEEEEEECCEEEEECCEEECCCHHHHHHCCCCEEEECCCCCCCCCC
SDDYRNDDTGFNLDAGIAMMPMDGLTLGLVGRNLIERELDTVESEGVSAIYRAGPMVTFG
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEE
AAFQSGNWQLSTDLDLMDNEKFVGLEGTKYWRLGAEWHALDWLSLRLGYRQDLNDMTADI
EEECCCCEEEEECCEECCCCEEEECCCCEEEEECCCEEHHHHHHHHCCCHHCHHHHHHHH
YSFGTGFQIGSGFKLDLAGMWGDKDTVGAVLQSSYHF
HHCCCCCEECCCCEEEEEECCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA