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The map label for this gene is rcp1 [H]

Identifier: 119776294

GI number: 119776294

Start: 3748831

End: 3749259

Strand: Reverse

Name: rcp1 [H]

Synonym: Sama_3162

Alternate gene names: 119776294

Gene position: 3749259-3748831 (Counterclockwise)

Preceding gene: 119776295

Following gene: 119776293

Centisome position: 87.07

GC content: 52.45

Gene sequence:

>429_bases
ATGACAGACGCGCAATACCGTGAAGTGGTGCTGTTTCTTGTGGACGACGACGACGTGGATTACATGGCGGTGGAACGCGC
GATGCGTCAAATGCGCCTGCTGAATCCGCTGGTGCGGGCCCGAGACGGCAGGGCCGCGCTGGAAATGCTCAATGGAGGCG
CGGTGCAGGGGGCCTTTGTGATTCTGCTGGATTTGAACATGCCCAGAATGAATGGCCTTGAATTTCTGCAAGCCCTGCGC
GCCGATCCGCAGTTTGCCTCTGCAGTGGTGTTTGTGCTGACTACCTCCCGTGCCGACGAAGATAAGTTGGCGGCCTATAG
TTTCAATGTGGCCGGTTATGTGGTCAAAAGTAATATAAAAGACGAATTTGAAAGAATTATCAATATGTTGGATGGGTACT
GGCGCATAGTGGAATTACCCAAATTATGA

Upstream 100 bases:

>100_bases
AAACCGTAGAACGCTATGGCGGCAAGGTCTGGCTGATTTCTCAGGGGAGAGGATGTCAGTTCTGGTTCTCATGGCCAAAA
CAATTGGGGGCGCAAAAAGC

Downstream 100 bases:

>100_bases
AGGTTAAACCATGAATTTATTACTGGTTGATGATGATGCAGTCGATCGTGAGATGATAGTTCGCGCGCTGTCCCAGTCAG
ACCGTGGTTTTACCGTGTCT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTDAQYREVVLFLVDDDDVDYMAVERAMRQMRLLNPLVRARDGRAALEMLNGGAVQGAFVILLDLNMPRMNGLEFLQALR
ADPQFASAVVFVLTTSRADEDKLAAYSFNVAGYVVKSNIKDEFERIINMLDGYWRIVELPKL

Sequences:

>Translated_142_residues
MTDAQYREVVLFLVDDDDVDYMAVERAMRQMRLLNPLVRARDGRAALEMLNGGAVQGAFVILLDLNMPRMNGLEFLQALR
ADPQFASAVVFVLTTSRADEDKLAAYSFNVAGYVVKSNIKDEFERIINMLDGYWRIVELPKL
>Mature_141_residues
TDAQYREVVLFLVDDDDVDYMAVERAMRQMRLLNPLVRARDGRAALEMLNGGAVQGAFVILLDLNMPRMNGLEFLQALRA
DPQFASAVVFVLTTSRADEDKLAAYSFNVAGYVVKSNIKDEFERIINMLDGYWRIVELPKL

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 16122; Mature: 15991

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAQYREVVLFLVDDDDVDYMAVERAMRQMRLLNPLVRARDGRAALEMLNGGAVQGAFV
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEE
ILLDLNMPRMNGLEFLQALRADPQFASAVVFVLTTSRADEDKLAAYSFNVAGYVVKSNIK
EEEECCCCCCCHHHHHHHHCCCCCHHHEEEEEEECCCCCCCHHEEEEECHHEEEEECCCH
DEFERIINMLDGYWRIVELPKL
HHHHHHHHHHHHHEEEEECCCC
>Mature Secondary Structure 
TDAQYREVVLFLVDDDDVDYMAVERAMRQMRLLNPLVRARDGRAALEMLNGGAVQGAFV
CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEE
ILLDLNMPRMNGLEFLQALRADPQFASAVVFVLTTSRADEDKLAAYSFNVAGYVVKSNIK
EEEECCCCCCCHHHHHHHHCCCCCHHHEEEEEEECCCCCCCHHEEEEECHHEEEEECCCH
DEFERIINMLDGYWRIVELPKL
HHHHHHHHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]