The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776288

Identifier: 119776288

GI number: 119776288

Start: 3743449

End: 3743859

Strand: Direct

Name: 119776288

Synonym: Sama_3156

Alternate gene names: NA

Gene position: 3743449-3743859 (Clockwise)

Preceding gene: 119776285

Following gene: 119776289

Centisome position: 86.93

GC content: 54.5

Gene sequence:

>411_bases
ATGAAACTGCCACCGCTGCCTCTGTGCCTGTTGTTCTGCATTTACCTTGTACTGGCTCTCTTATCCATTACCCGCGTCAT
CATTACCGGTAATCTGGATATGTTTACGCTTGGGGTATTGCCGGTATTGGTGGGCCTGGTGCTTAAAACCACCTGGGCGC
TGTGGGCCGTGCGCATTTATACAGCCATTCAAACCCTTGGCTGCGCTGCACTGGGGGTTACGGCTATTATCGCCAGCCAC
ATCAGCCCTGAAGATACCCGGCTGTTTTTCGCCGGGGCTGAGATCCCCCTGTGGCTGGTTGCGGCCACTCTTTTTGTGCT
GCTTTCATTTCAATGGTGGGTGGCGTTTCTCCCCTCGACCCGCACGTATCTGTTCACAGAGTCAGAAACCAACGCTCAAC
ACCACCGCTGA

Upstream 100 bases:

>100_bases
TCATATCATTGCCTCTGTTTTGGGAGCGCCATTTTACACTGAACTGGACTGTCTCTCTGGCTTTTTCTACACTTGGGCGA
CTTTTTTGCCGGAACCCACC

Downstream 100 bases:

>100_bases
GAATAGGCTTGAATTCAGGCCTGTGTGCATAGGCGGGATGGATAAGCATGCTTGCCAAAGACTGAGCAACTGGGTTAGCG
TTACAAACCCGCAACAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKLPPLPLCLLFCIYLVLALLSITRVIITGNLDMFTLGVLPVLVGLVLKTTWALWAVRIYTAIQTLGCAALGVTAIIASH
ISPEDTRLFFAGAEIPLWLVAATLFVLLSFQWWVAFLPSTRTYLFTESETNAQHHR

Sequences:

>Translated_136_residues
MKLPPLPLCLLFCIYLVLALLSITRVIITGNLDMFTLGVLPVLVGLVLKTTWALWAVRIYTAIQTLGCAALGVTAIIASH
ISPEDTRLFFAGAEIPLWLVAATLFVLLSFQWWVAFLPSTRTYLFTESETNAQHHR
>Mature_136_residues
MKLPPLPLCLLFCIYLVLALLSITRVIITGNLDMFTLGVLPVLVGLVLKTTWALWAVRIYTAIQTLGCAALGVTAIIASH
ISPEDTRLFFAGAEIPLWLVAATLFVLLSFQWWVAFLPSTRTYLFTESETNAQHHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15115; Mature: 15115

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPPLPLCLLFCIYLVLALLSITRVIITGNLDMFTLGVLPVLVGLVLKTTWALWAVRIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIQTLGCAALGVTAIIASHISPEDTRLFFAGAEIPLWLVAATLFVLLSFQWWVAFLPST
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RTYLFTESETNAQHHR
CEEEEECCCCCCCCCC
>Mature Secondary Structure
MKLPPLPLCLLFCIYLVLALLSITRVIITGNLDMFTLGVLPVLVGLVLKTTWALWAVRIY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAIQTLGCAALGVTAIIASHISPEDTRLFFAGAEIPLWLVAATLFVLLSFQWWVAFLPST
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
RTYLFTESETNAQHHR
CEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA