| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cheY [H]
Identifier: 119776289
GI number: 119776289
Start: 3743971
End: 3744771
Strand: Direct
Name: cheY [H]
Synonym: Sama_3157
Alternate gene names: 119776289
Gene position: 3743971-3744771 (Clockwise)
Preceding gene: 119776288
Following gene: 119776290
Centisome position: 86.94
GC content: 52.43
Gene sequence:
>801_bases ATGCATCAATTGTCACCGGGCGAGCTGTCCATCCTACTGGTGGAGCCTTCAGACACCCAGCGTAAAATCATCATCGCCAG CCTGAAAAATGAAGGCATTCTCAACATCGAAACCGCCGGTGGTTTTGATGAGGCCAGGCAAATACTCACAGAGCACAAAC CCGATTTGATTGCCAGCGCCATGCACTATAGCGATGGTGATGCCCTCAAGCTGCTGACCTACATCAAGAGTGACAGCCGA TGTCAGGATATCCAGTTTATGTTGGTTTCCAGTGAATGCCGTCGCGAGCAGTTGGAGGTGTTCCGCCAGTCAGGTGTGGT GGCCATCTTGCCTAAGCCCTTTTCCAAAGAGCATCTTGGAAAAGCACTCAACGCTACCATTGATCTCCTTTCCAACGATG AGTTGGACCTGGATCACTTCGATGTGCAGGATCTGCGGGTGTTGGTGGTGGACGACAGCCGCATGGCCCGTAACATCATC CGCCGCACCCTGAGTAACCTGGGAATGCGGCAAATTGTTGAAGCCTGTGATGGCGCCGAAGCCATCGAACTTATGCGCGA GCAGATGTTCGATCTGGTGGTCACCGACTACAACATGCCCAGTGTGGACGGCCTGGAACTGACCCAATTTATCCGCAACG AGAGTCAGCAGTCCCATATTCCCATCTTGATGGTGTCGTCAGAAGCCAACGATGCCCACTTATCCAACGTGTGCCAGGCC GGCGTTAACGCCCTGTGTGATAAGCCATTTGAGCCTCAATTGGTGAAACAAATCCTCTATCAGCTGCTGGATGCCAATTA A
Upstream 100 bases:
>100_bases AATTCAGGCCTGTGTGCATAGGCGGGATGGATAAGCATGCTTGCCAAAGACTGAGCAACTGGGTTAGCGTTACAAACCCG CAACAACAGTCTTAACAGCC
Downstream 100 bases:
>100_bases TGTGACAAAACCCACTGGAAAATTGATCCCGAGCGGGATTTGGGCCCCAAAACCGCTTCCCAAACGCTAATGCCTGTGGC ATGTTAGGCGAGTTTTAAAA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MHQLSPGELSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASAMHYSDGDALKLLTYIKSDSR CQDIQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLGKALNATIDLLSNDELDLDHFDVQDLRVLVVDDSRMARNII RRTLSNLGMRQIVEACDGAEAIELMREQMFDLVVTDYNMPSVDGLELTQFIRNESQQSHIPILMVSSEANDAHLSNVCQA GVNALCDKPFEPQLVKQILYQLLDAN
Sequences:
>Translated_266_residues MHQLSPGELSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASAMHYSDGDALKLLTYIKSDSR CQDIQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLGKALNATIDLLSNDELDLDHFDVQDLRVLVVDDSRMARNII RRTLSNLGMRQIVEACDGAEAIELMREQMFDLVVTDYNMPSVDGLELTQFIRNESQQSHIPILMVSSEANDAHLSNVCQA GVNALCDKPFEPQLVKQILYQLLDAN >Mature_266_residues MHQLSPGELSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASAMHYSDGDALKLLTYIKSDSR CQDIQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLGKALNATIDLLSNDELDLDHFDVQDLRVLVVDDSRMARNII RRTLSNLGMRQIVEACDGAEAIELMREQMFDLVVTDYNMPSVDGLELTQFIRNESQQSHIPILMVSSEANDAHLSNVCQA GVNALCDKPFEPQLVKQILYQLLDAN
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=35.2459016393443, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789149, Length=178, Percent_Identity=26.9662921348315, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI145693157, Length=119, Percent_Identity=31.9327731092437, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787487, Length=106, Percent_Identity=32.0754716981132, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=126, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 29834; Mature: 29834
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQLSPGELSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASA CCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCHHHHHHH MHYSDGDALKLLTYIKSDSRCQDIQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLG HHCCCCCHHHHHHHHCCCCCCCHHHHEEHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH KALNATIDLLSNDELDLDHFDVQDLRVLVVDDSRMARNIIRRTLSNLGMRQIVEACDGAE HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCHH AIELMREQMFDLVVTDYNMPSVDGLELTQFIRNESQQSHIPILMVSSEANDAHLSNVCQA HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH GVNALCDKPFEPQLVKQILYQLLDAN HHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHQLSPGELSILLVEPSDTQRKIIIASLKNEGILNIETAGGFDEARQILTEHKPDLIASA CCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHCCHHHHHHH MHYSDGDALKLLTYIKSDSRCQDIQFMLVSSECRREQLEVFRQSGVVAILPKPFSKEHLG HHCCCCCHHHHHHHHCCCCCCCHHHHEEHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH KALNATIDLLSNDELDLDHFDVQDLRVLVVDDSRMARNIIRRTLSNLGMRQIVEACDGAE HHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHCCCHH AIELMREQMFDLVVTDYNMPSVDGLELTQFIRNESQQSHIPILMVSSEANDAHLSNVCQA HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH GVNALCDKPFEPQLVKQILYQLLDAN HHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9720026 [H]